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L3_068_000M1_scaffold_890

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_890_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(161..2605)
DNA (2445bp) protein (815aa)
cepA; cellobiose-phosphorylase CepA (EC:2.4.1.20)
Glycosyltransferase 36 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJV8_9FIRM
Glycosyltransferase 36 {ECO:0000313|EMBL:CDE50882.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_890_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2850..4013
DNA (1164bp) protein (388aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Cysteine desulfurase NifS n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHF2_9FIRM
cysteine desulfurase NifS
L3_068_000M1_scaffold_890_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4333..4782)
DNA (450bp) protein (150aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.57)
Acetyltransferases including N-acetylases of ribosomal proteins n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGG2_9FIRM
Acetyltransferases including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CDE50879.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_890_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4962..5387
DNA (426bp) protein (142aa)
YncF n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJV6_9FIRM
YncF {ECO:0000313|EMBL:CDE50877.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
yncF; hypothetical protein
L3_068_000M1_scaffold_890_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5384..6322
DNA (939bp) protein (313aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGZ7_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDE50875.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
metallo-beta-lactamase superfamily protein
L3_068_000M1_scaffold_890_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6425..7294
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50874.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_890_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7291..7893
DNA (603bp) protein (201aa)
Hypothetical Cytosolic Protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHE5_9FIRM
Hypothetical Cytosolic Protein {ECO:0000313|EMBL:CDE50871.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
TfoX domain-containing protein
L3_068_000M1_scaffold_890_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8136..8567
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGZ2_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
50S ribosomal protein L13
L3_068_000M1_scaffold_890_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8588..8977
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGF2_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rpsI; ribosomal protein S9/S16
L3_068_000M1_scaffold_890_10
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9185..10444)
DNA (1260bp) protein (420aa)
Putative phage integrase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0F2_9FIRM
Putative phage integrase {ECO:0000313|EMBL:CCZ84058.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
integrase family protein
L3_068_000M1_scaffold_890_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10587..11957)
DNA (1371bp) protein (457aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTS8_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBL41220.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_068_000M1_scaffold_890_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12948..15458
DNA (2511bp) protein (837aa)
Uncharacterized protein n=2 Tax=root RepID=R7JUJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66492.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_068_000M1_scaffold_890_13
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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15483..16739
DNA (1257bp) protein (419aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DDZ2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI94563.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
AraC family transcriptional regulator
L3_068_000M1_scaffold_890_14
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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16736..18580
DNA (1845bp) protein (615aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYP6_MAHA5
integral membrane sensor signal transduction histidine kinase
L3_068_000M1_scaffold_890_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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18564..19517
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42861.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_068_000M1_scaffold_890_16
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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19637..21406
DNA (1770bp) protein (590aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FJS5_PAEMK
Lipoprotein LipO {ECO:0000313|EMBL:KHF34274.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
ABC transporter substrate-binding protein
L3_068_000M1_scaffold_890_17
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21498..22409
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus lactis 154 RepID=G4H9B6_9BACL
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB68451.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
binding-protein-dependent transport system inner membrane protein
L3_068_000M1_scaffold_890_18
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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22424..23305
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI000369C7F9
ABC transporter permease {ECO:0000313|EMBL:KIL38042.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
binding-protein-dependent transport system inner membrane protein
L3_068_000M1_scaffold_890_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23334..24548
DNA (1215bp) protein (405aa)
alpha,alpha-trehalase (EC:3.2.1.28)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XQF1_9BACE
Tax=CG_Paludi_01
L3_068_000M1_scaffold_890_20
CG_Arma_01, Armatimonadetes, Bacteria

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24628..28119
DNA (3492bp) protein (1164aa)
Tax=CG_Arma_01
L3_068_000M1_scaffold_890_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28122..30881
DNA (2760bp) protein (920aa)
Glycosyl hydrolase family 3 protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CVV5_9CLOT
Glycosyl hydrolase family 3 protein {ECO:0000313|EMBL:ERI71421.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
bgl3B; beta-glucosidase Bgl3B
L3_068_000M1_scaffold_890_22
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

30890..32719
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TE86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70555.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_068_000M1_scaffold_890_23
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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32740..35295
DNA (2556bp) protein (852aa)
glycosyl transferase family 2 n=1 Tax=Paenibacillus fonticola RepID=UPI00037BF2AD
Glycosyl hydrolases family 2, sugar binding domain protein {ECO:0000313|EMBL:KFN12111.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
glycosyl transferase family 2
L3_068_000M1_scaffold_890_24
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35306..37024
DNA (1719bp) protein (573aa)
Alpha-galactosidase family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D343_9CLOT
Alpha-galactosidase family protein {ECO:0000313|EMBL:CDA78481.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
glycoside hydrolase
Displaying 24 items

View Taxonomy