ggKbase home page

L3_068_000M1_scaffold_3294

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3294_1
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174..275)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BBK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ35858.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_068_000M1_scaffold_3294_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(541..2046)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WEE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59713.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000M1_scaffold_3294_3
Streptococcus sp. SR1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2004..2753)
DNA (750bp) protein (250aa)
Putative capsular biosynthesis protein n=1 Tax=Streptococcus oralis SK304 RepID=J4THE4_STROR
Putative capsular biosynthesis protein {ECO:0000313|EMBL:EUC80507.1}; TaxID=1161416 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. SR1.;"
glycosyl transferase family protein
L3_068_000M1_scaffold_3294_4
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2753..3484)
DNA (732bp) protein (244aa)
Putative uncharacterized protein wcxT n=1 Tax=Streptococcus pneumoniae RepID=Q4K1H4_STREE
Putative uncharacterized protein wcxT {ECO:0000313|EMBL:CAI33442.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
glycosyl transferase GT2 family
L3_068_000M1_scaffold_3294_5
Streptococcus sp. SR1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3456..4658)
DNA (1203bp) protein (401aa)
Putative membrane protein n=1 Tax=Streptococcus oralis SK304 RepID=J4UG24_STROR
Putative membrane protein {ECO:0000313|EMBL:EUC80426.1}; TaxID=1161416 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. SR1.;"
polysaccharide polymerase
L3_068_000M1_scaffold_3294_6
Lactobacillus ruminis CAG:367, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4659..5576)
DNA (918bp) protein (306aa)
Glycosyltransferase n=1 Tax=Lactobacillus ruminis CAG:367 RepID=R6SF97_9LACO
Glycosyltransferase {ECO:0000313|EMBL:CDC59823.1}; TaxID=1263085 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; environmental samples.;" source="Lactobacillus ruminis CAG:367.;"
glycosyltransferase
L3_068_000M1_scaffold_3294_7
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5594..6448)
DNA (855bp) protein (285aa)
LicD family protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VA59_9FIRM
LicD family protein {ECO:0000313|EMBL:CDC95153.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
licD family protein
L3_068_000M1_scaffold_3294_8
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6476..7570)
DNA (1095bp) protein (365aa)
Putative glycosyl transferase n=1 Tax=Clostridium sp. CAG:590 RepID=R5E9Z8_9CLOT
Putative glycosyl transferase {ECO:0000313|EMBL:CCX88029.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
glycosyltransferase
L3_068_000M1_scaffold_3294_9
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7604..8080)
DNA (477bp) protein (159aa)
Glycosyltransferase family 28 C-terminal domain protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R607_9FIRM
Glycosyltransferase family 28 C-terminal domain protein {ECO:0000313|EMBL:EGW41275.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
glycosyltransferase 28 domain-containing protein
L3_068_000M1_scaffold_3294_10
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8096..8572)
DNA (477bp) protein (159aa)
Oligosaccharide biosynthesis Alg14 like family protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R940_9FIRM
Oligosaccharide biosynthesis Alg14 like family protein {ECO:0000313|EMBL:CDF46386.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
polysaccharide biosynthesis protein
L3_068_000M1_scaffold_3294_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8653..10239)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98661.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_068_000M1_scaffold_3294_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10261..11721)
DNA (1461bp) protein (487aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Glycosyl transferase CpsE n=1 Tax=Roseburia sp. CAG:18 RepID=R5VER3_9FIRM
Glycosyl transferase CpsE {ECO:0000313|EMBL:CCZ79232.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying 12 items

View Taxonomy