ggKbase home page

L3_068_000M1_scaffold_375

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_375_1
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


404..712
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Staphylococcus sp. CAG:324 PF7_9STAP">RepID=R6TPF7_9STAP
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L10
L3_068_000M1_scaffold_375_2
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


735..1394
DNA (660bp) protein (220aa)
50S ribosomal protein L3 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TUW8_9STAP
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L3
L3_068_000M1_scaffold_375_3
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


1412..2038
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TE37_9STAP
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplD; ribosomal protein L4
L3_068_000M1_scaffold_375_4
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


2038..2322
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULN6_9STAP
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplW; 50S ribosomal protein L23
L3_068_000M1_scaffold_375_5
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


2340..3173
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THH6_9STAP
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplB; 50S ribosomal protein L2
L3_068_000M1_scaffold_375_6
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


3189..3467
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULN1_9STAP
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsS; 30S ribosomal protein S19
L3_068_000M1_scaffold_375_7
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


3479..3817
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TPE4_9STAP
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplV; 50S ribosomal protein L22
L3_068_000M1_scaffold_375_8
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


3831..4502
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULM5_9STAP
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsC; 30S ribosomal protein S3
L3_068_000M1_scaffold_375_9
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


4505..4924
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TPE1_9STAP
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplP; 50S ribosomal protein L16
L3_068_000M1_scaffold_375_10
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


4924..5172
DNA (249bp) protein (83aa)
50S ribosomal protein L29 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULM0_9STAP
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpmC; 50S ribosomal protein L29
L3_068_000M1_scaffold_375_11
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


5186..5446
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THG1_9STAP
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
30S ribosomal protein S17
L3_068_000M1_scaffold_375_12
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


5461..5829
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TE20_9STAP
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L14
L3_068_000M1_scaffold_375_13
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


5846..6172
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULL6_9STAP
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplX; 50S ribosomal protein L24
L3_068_000M1_scaffold_375_14
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


6193..6735
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THF6_9STAP
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplE; 50S ribosomal protein L5
L3_068_000M1_scaffold_375_15
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


6746..6931
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TE15_9STAP
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsN; 30S ribosomal protein S14
L3_068_000M1_scaffold_375_16
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


6946..7341
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TUT8_9STAP
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsH; 30S ribosomal protein S8
L3_068_000M1_scaffold_375_17
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


7353..7889
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TE12_9STAP
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L6
L3_068_000M1_scaffold_375_18
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


7909..8271
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TUT4_9STAP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplR; 50S ribosomal protein L18
L3_068_000M1_scaffold_375_19
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


8284..8811
DNA (528bp) protein (176aa)
30S ribosomal protein S5 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TE08_9STAP
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsE; 30S ribosomal protein S5
L3_068_000M1_scaffold_375_20
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


8824..9006
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TUT0_9STAP
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpmD; 50S ribosomal protein L30
L3_068_000M1_scaffold_375_21
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


9018..9461
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THD1_9STAP
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L15
L3_068_000M1_scaffold_375_22
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


9463..10779
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THC5_9STAP
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
secY; Protein translocase subunit SecY
L3_068_000M1_scaffold_375_23
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

10793..11434
DNA (642bp) protein (214aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TUR8_9STAP
L3_068_000M1_scaffold_375_24
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

11436..12197
DNA (762bp) protein (254aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TDZ0_9STAP
L3_068_000M1_scaffold_375_25
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

12197..12418
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THB3_9STAP
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
translation initiation factor IF-1
L3_068_000M1_scaffold_375_26
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

12462..12578
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=2 Tax=Firmicutes RepID=R6ULH8_9STAP
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
rpmJ; 50S ribosomal protein L36
L3_068_000M1_scaffold_375_27
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


12597..12962
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TPA3_9STAP
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsM; 30S ribosomal protein S13
L3_068_000M1_scaffold_375_28
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


12977..13363
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THA2_9STAP
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsK; 30S ribosomal protein S11
L3_068_000M1_scaffold_375_29
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

13421..14536
DNA (1116bp) protein (372aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TH99_9STAP
L3_068_000M1_scaffold_375_30
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


14574..14936
DNA (363bp) protein (121aa)
50S ribosomal protein L17 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6ULG4_9STAP
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rplQ; 50S ribosomal protein L17
Displaying items 1-30 of 78 in total

View Taxonomy