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L3_068_000M1_scaffold_4417

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_4417_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:75 RepID=R5T0N6_9CLOT
tRNA pseudouridine synthase B
L3_068_000M1_scaffold_4417_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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comp(260..1225)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003790D7D
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
L3_068_000M1_scaffold_4417_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1222..1608)
DNA (387bp) protein (129aa)
Ribosome-binding factor A n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y6A7_CLOSH
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_068_000M1_scaffold_4417_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1687..4686)
DNA (3000bp) protein (1000aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5W0_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
translation initiation factor IF-2
L3_068_000M1_scaffold_4417_5
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4689..5021)
DNA (333bp) protein (111aa)
Ribosomal protein L7Ae/L30e/S12e/gadd45 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K7B9_9FIRM
Ribosomal protein L7Ae family protein {ECO:0000313|EMBL:CCJ33533.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
L3_068_000M1_scaffold_4417_6
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5014..5283)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EYE88177.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L3_068_000M1_scaffold_4417_7
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5371..6531)
DNA (1161bp) protein (387aa)
Transcription termination factor NusA n=1 Tax=Thermincola potens (strain JR) RepID=D5XF10_THEPJ
transcription termination factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L3_068_000M1_scaffold_4417_8
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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comp(6547..7005)
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GNR8_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
hypothetical protein
L3_068_000M1_scaffold_4417_9
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7209..8777)
DNA (1569bp) protein (523aa)
O-antigen polymerase n=1 Tax=Bulleidia extructa W1219 RepID=D2MP28_9FIRM
O-antigen polymerase {ECO:0000313|EMBL:EFC05648.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
hypothetical protein
Displaying 9 items

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