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L3_068_000M1_scaffold_1332

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1332_1
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132..983)
DNA (852bp) protein (284aa)
Permease protein of sugar ABC transporter n=1 Tax=Clostridium sp. CAG:306 RepID=R6P0Q9_9CLOT
Permease protein of sugar ABC transporter {ECO:0000313|EMBL:CDC17968.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
lactose ABC transporter permease
L3_068_000M1_scaffold_1332_2
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(994..1866)
DNA (873bp) protein (291aa)
Lactose transport system permease protein LacF n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7Q0_9CLOT
Lactose transport system permease protein LacF {ECO:0000313|EMBL:CDC17967.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
lactose ABC transporter permease
L3_068_000M1_scaffold_1332_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1888..2868)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6L1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25350.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1332_4
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2871..3548)
DNA (678bp) protein (226aa)
Two-component response regulator n=1 Tax=Clostridium sp. CAG:306 RepID=R6PHM6_9CLOT
Two-component response regulator {ECO:0000313|EMBL:CDC17966.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
two-component response regulator
L3_068_000M1_scaffold_1332_5
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3557..5113)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17965.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
response receiver sensor histidine kinase, PAS domain-containing
L3_068_000M1_scaffold_1332_6
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5230..5712
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PB48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17964.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
AsnC family transcriptional regulator
L3_068_000M1_scaffold_1332_7
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5709..6872
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P0Q4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17963.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
aspartate/tyrosine/aromatic aminotransferase
L3_068_000M1_scaffold_1332_8
unknown

Not on your lists

6975..7649
DNA (675bp) protein (225aa)

This feature has no annotations

L3_068_000M1_scaffold_1332_9
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7925..8923
DNA (999bp) protein (333aa)
Oxidoreductase Gfo/Idh/MocA family/transferase hexapeptide repeat protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7P7_9CLOT
Oxidoreductase Gfo/Idh/MocA family/transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDC17962.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
Oxidoreductase domain protein
L3_068_000M1_scaffold_1332_10
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8953..9627
DNA (675bp) protein (225aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PHL9_9CLOT
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDC17961.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
CDP-alcohol phosphatidyltransferase
L3_068_000M1_scaffold_1332_11
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9687..10607
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3C7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17960.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_068_000M1_scaffold_1332_12
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10604..11068
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PB43_9CLOT
rRNA methylase
L3_068_000M1_scaffold_1332_13
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11074..11958
DNA (885bp) protein (295aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Clostridium sp. CAG:306 RepID=R6P0P7_9CLOT
hypothetical protein
L3_068_000M1_scaffold_1332_14
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11960..12661
DNA (702bp) protein (234aa)
Lipoate-protein ligase A n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7P2_9CLOT
Lipoate-protein ligase A {ECO:0000313|EMBL:CDC17957.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
lipoate-protein ligase A
L3_068_000M1_scaffold_1332_15
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12658..14565)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PHL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17956.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
hypothetical protein
L3_068_000M1_scaffold_1332_16
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14739..16496
DNA (1758bp) protein (586aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3C1_9CLOT
L3_068_000M1_scaffold_1332_17
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16539..16997)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PB38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17954.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
L3_068_000M1_scaffold_1332_18
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16997..18019)
DNA (1023bp) protein (341aa)
Glycosyl transferase family 9 n=1 Tax=Clostridium sp. CAG:306 RepID=R6P0P1_9CLOT
Glycosyl transferase family 9 {ECO:0000313|EMBL:CDC17953.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
rfaF; lipopolysaccharide heptosyltransferase II
L3_068_000M1_scaffold_1332_19
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18097..18294)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17952.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
arginase
L3_068_000M1_scaffold_1332_20
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18445..18972)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17952.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
arginase
L3_068_000M1_scaffold_1332_21
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19297..19620
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:306 RepID=R6PHK6_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
thioredoxin
L3_068_000M1_scaffold_1332_22
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19676..22435)
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17950.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_068_000M1_scaffold_1332_23
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22611..23111)
DNA (501bp) protein (167aa)
UPF0234 protein BN597_00843 n=1 Tax=Clostridium sp. CAG:306 RepID=R6PB33_9CLOT
UPF0234 protein BN597_00843 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
nucleotide-binding protein
L3_068_000M1_scaffold_1332_24
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23163..24062)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P0N6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17948.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_068_000M1_scaffold_1332_25
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24087..24695)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6Q7N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17947.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_068_000M1_scaffold_1332_26
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24769..25998
DNA (1230bp) protein (410aa)
AAA ATPase central domain protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PHJ9_9CLOT
AAA ATPase central domain protein {ECO:0000313|EMBL:CDC17946.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
ATPase AAA
L3_068_000M1_scaffold_1332_27
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26067..26606)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6P3A9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17945.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
L3_068_000M1_scaffold_1332_28
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26729..27163)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PB25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC17944.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
hypothetical protein
L3_068_000M1_scaffold_1332_29
unknown

Not on your lists

27164..27223
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 29 items

View Taxonomy