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L3_068_000M1_scaffold_5005

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_5005_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..186
DNA (186bp) protein (62aa)
Abortive infection bacteriophage resistance protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B647_9CLOT
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:CCX51015.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Abortive infection bacteriophage resistance protein
L3_068_000M1_scaffold_5005_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(365..595)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q842_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52536.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_068_000M1_scaffold_5005_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(567..659)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PPV1_9FIRM
Region found in RelA / SpoT proteins.
Uncharacterized protein {ECO:0000313|EMBL:ERK52535.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_068_000M1_scaffold_5005_4
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(659..1135)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K6B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39017.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
RRF2 family protein
L3_068_000M1_scaffold_5005_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1270..2025
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JY43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39018.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L3_068_000M1_scaffold_5005_6
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2408..3028)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7H4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73252.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_068_000M1_scaffold_5005_7
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3198..3896)
DNA (699bp) protein (233aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
pcp; pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Blautia sp. CAG:37 RepID=R7JSC2_9FIRM
L3_068_000M1_scaffold_5005_8
unknown

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comp(3976..4338)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_068_000M1_scaffold_5005_9
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4705..5337)
DNA (633bp) protein (211aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2C209_TREDN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS10852.1}; TaxID=243275 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222).;"
L3_068_000M1_scaffold_5005_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(5386..6435)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H8C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21167.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptidase S58 DmpA
L3_068_000M1_scaffold_5005_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6479..7318)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76146.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
L3_068_000M1_scaffold_5005_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7754..7861)
DNA (108bp) protein (36aa)
Transcriptional regulator, MerR family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTQ0_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBL41192.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying 12 items

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