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L3_068_000M1_scaffold_2168

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2168_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

L3_068_000M1_scaffold_2168_2
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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280..480
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NMD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13353.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_068_000M1_scaffold_2168_3
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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642..905
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PU84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13352.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_068_000M1_scaffold_2168_4
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(957..3038)
DNA (2082bp) protein (694aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Streptococcus suis T15 RepID=U5UFS7_STRSU
DEAD/DEAH box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AGZ23557.1}; TaxID=1340847 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis T15.;"
L3_068_000M1_scaffold_2168_5
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3013..3957)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Streptococcus suis T15 RepID=U5UFW1_STRSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ23558.1}; TaxID=1340847 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis T15.;"
L3_068_000M1_scaffold_2168_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4015..5862)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHI4_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU21229.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_068_000M1_scaffold_2168_7
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5862..8942)
DNA (3081bp) protein (1027aa)
Eco57I restriction-modification methylase {ECO:0000313|EMBL:ETO95389.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Type I restriction enzyme HsdR protein N-terminal domain protein id=3317720 bin=GWF2_Bacteroidetes_40_14 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
L3_068_000M1_scaffold_2168_8
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8972..9796)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WGJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD10238.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Domain of unknown function (DUF1814).
L3_068_000M1_scaffold_2168_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9793..10386)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUG7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41459.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_068_000M1_scaffold_2168_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11544..12011
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NY28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13344.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_068_000M1_scaffold_2168_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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11977..12483
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43099.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Relaxase/Mobilisation nuclease domain.
L3_068_000M1_scaffold_2168_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12529..13563
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NMC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13343.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_068_000M1_scaffold_2168_13
unknown

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13656..13769
DNA (114bp) protein (38aa)

This feature has no annotations

L3_068_000M1_scaffold_2168_14

Not on your lists

13766..14023
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1T2C6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC53631.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_068_000M1_scaffold_2168_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14002..14214
DNA (213bp) protein (71aa)
TnpX site-specific recombinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C4_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EEU95884.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_068_000M1_scaffold_2168_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14326..14718
DNA (393bp) protein (131aa)
Resolvase, N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBS2_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDP22427.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_068_000M1_scaffold_2168_17
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14749..15744
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66443.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_068_000M1_scaffold_2168_18
unknown

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16195..17718
DNA (1524bp) protein (508aa)

This feature has no annotations

Displaying 18 items

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