ggKbase home page

L3_068_000M1_scaffold_2232

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2232_1
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..628
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J8S8_9FIRM
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:GAE88362.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
ABC transporter
L3_068_000M1_scaffold_2232_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

631..2394
DNA (1764bp) protein (588aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ANX7_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA53758.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000M1_scaffold_2232_3
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2455..2970
DNA (516bp) protein (172aa)
Putative manganese efflux pump MntP n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K1A3_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Predicted membrane protein
L3_068_000M1_scaffold_2232_4
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3026..3700)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WBI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04209.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_068_000M1_scaffold_2232_5
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(3697..5079)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HZR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43418.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_068_000M1_scaffold_2232_6
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5379..6194
DNA (816bp) protein (272aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17936.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_068_000M1_scaffold_2232_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6525..9806
DNA (3282bp) protein (1094aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NW04_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CCY92151.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_068_000M1_scaffold_2232_8
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9881..11299)
DNA (1419bp) protein (473aa)
Bleomycin hydrolase (EC:3.4.22.40)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2ZFB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89854.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_068_000M1_scaffold_2232_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11419..12609
DNA (1191bp) protein (397aa)
Iron complex ABC transporter substrate-binding protein n=2 Tax=Clostridium RepID=N9XN80_9CLOT
Iron complex ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ16786.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter substrate-binding protein
L3_068_000M1_scaffold_2232_10
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12593..13618
DNA (1026bp) protein (342aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BRT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58320.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
ABC transporter permease
L3_068_000M1_scaffold_2232_11
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

13615..14412
DNA (798bp) protein (266aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components {ECO:0000313|EMBL:CBL28719.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBL28719.1};; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components n=1 Tax=Fretibacterium fastidiosum RepID=D4MA24_9BACT
L3_068_000M1_scaffold_2232_12
unknown

Not on your lists

14382..15137
DNA (756bp) protein (252aa)

This feature has no annotations

L3_068_000M1_scaffold_2232_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15130..15456
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RWW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49854.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_000M1_scaffold_2232_14

Not on your lists

15563..16612
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=uncultured bacterium RepID=G8FXK2_9BACT
L3_068_000M1_scaffold_2232_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16725..17150
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52347.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
Displaying 15 items

View Taxonomy