ggKbase home page

L3_068_000M1_scaffold_2328

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2328_1
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107..1453)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=F3AZU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG91130.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
hypothetical protein
L3_068_000M1_scaffold_2328_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1497..2531)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacillus cereus Rock4-18 RepID=C2X0Q2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EEL59970.1}; TaxID=526988 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus Rock4-18.;"
L3_068_000M1_scaffold_2328_3
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2735..4513)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB68941.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
L3_068_000M1_scaffold_2328_4
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4525..6540)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R525_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIC94783.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
hypothetical protein
L3_068_000M1_scaffold_2328_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6870..7070)
DNA (201bp) protein (67aa)
transposase n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B3187C
Uncharacterized protein {ECO:0000313|EMBL:EDN77160.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_068_000M1_scaffold_2328_6
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7931..9121)
DNA (1191bp) protein (397aa)
Abortive phage infection n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3S2_ETHHY
abortive phage infection protein
Abortive phage infection {ECO:0000313|EMBL:ADU26489.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_068_000M1_scaffold_2328_7
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9247..9555
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FBW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99547.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_068_000M1_scaffold_2328_8
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9559..9963)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C93
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17335.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_068_000M1_scaffold_2328_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9977..11176)
DNA (1200bp) protein (400aa)
Plasmid recombination enzyme n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG13_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:ERJ91192.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
plasmid recombination protein
L3_068_000M1_scaffold_2328_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11491..12615)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91191.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2328_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12615..12935)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KGG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91190.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2328_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12916..14013)
DNA (1098bp) protein (366aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNW4_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ91189.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Site-specific recombinase XerD
L3_068_000M1_scaffold_2328_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14013..14267)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LVP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91188.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2328_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14423..14914
DNA (492bp) protein (164aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG09_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERJ91187.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Helix-turn-helix.
L3_068_000M1_scaffold_2328_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15027..16565)
DNA (1539bp) protein (513aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JY26_9FIRM
GMP synthase
L3_068_000M1_scaffold_2328_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16812..17087)
DNA (276bp) protein (92aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNW1_9FIRM
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ERJ91184.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
antibiotic biosynthesis monooxygenase
L3_068_000M1_scaffold_2328_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17084..17764)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LVP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91183.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
Displaying 17 items

View Taxonomy