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L3_068_000M1_scaffold_2388

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2388_1
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(299..529)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BN76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66593.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_068_000M1_scaffold_2388_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(556..852)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HPT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31763.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Protein of unknown function (DUF2442).
L3_068_000M1_scaffold_2388_3
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(869..1135)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N802_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08756.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_068_000M1_scaffold_2388_4
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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1597..2325
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Allofustis seminis RepID=UPI00037E5AAF
Uncharacterized protein {ECO:0000313|EMBL:EOS31249.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
transcriptional regulator, MerR family
L3_068_000M1_scaffold_2388_5
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2466..3071)
DNA (606bp) protein (202aa)
Spore coat protein JC n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPN0_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03913.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Mn-containing catalase
L3_068_000M1_scaffold_2388_6
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3071..3310)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5WGT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91742.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L3_068_000M1_scaffold_2388_7
unknown

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comp(3303..3572)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_068_000M1_scaffold_2388_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3784..7338
DNA (3555bp) protein (1185aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61563.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_068_000M1_scaffold_2388_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7353..8633
DNA (1281bp) protein (427aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WXN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67957.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_000M1_scaffold_2388_10
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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8647..9462
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QWU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC40310.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L3_068_000M1_scaffold_2388_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9492..12134
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Clostridium RepID=E9STE0_CLOSY
L3_068_000M1_scaffold_2388_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12231..13418)
DNA (1188bp) protein (396aa)
Methyltransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SR32_9CLOT
Methyltransferase {ECO:0000313|EMBL:CDC49047.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Methyltransferase domain.
L3_068_000M1_scaffold_2388_13
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13544..14479
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DLY2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP97597.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
L3_068_000M1_scaffold_2388_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14548..14685
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FUR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11099.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000M1_scaffold_2388_15
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14712..16271
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2APT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ28448.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
Displaying 15 items

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