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L3_068_000M1_scaffold_2642

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2642_1
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..959
DNA (957bp) protein (319aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHD4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY60382.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
two component transcriptional regulator, AraC family
L3_068_000M1_scaffold_2642_2
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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946..2667
DNA (1722bp) protein (574aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QLH9_9FIRM
L3_068_000M1_scaffold_2642_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2795..4075
DNA (1281bp) protein (427aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VHE9_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDO56658.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2642_4
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4347..5570
DNA (1224bp) protein (408aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDV1_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK83084.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_2642_5
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5570..6442
DNA (873bp) protein (291aa)
ABC transporter permease protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VPZ1_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ92535.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2642_6
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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6457..8118
DNA (1662bp) protein (554aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R2U9_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC37431.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2642_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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8253..8870
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EZY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX93586.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ADP-ribose pyrophosphatase
L3_068_000M1_scaffold_2642_8
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8980..9837
DNA (858bp) protein (286aa)
RssA protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I4M1_9CLOT
RssA protein {ECO:0000313|EMBL:CDE46804.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_068_000M1_scaffold_2642_9
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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9868..11061
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N6F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07698.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
putative aminotransferase
L3_068_000M1_scaffold_2642_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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11103..12245
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40733.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_068_000M1_scaffold_2642_11
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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12232..13665
DNA (1434bp) protein (478aa)
Xanthine/uracil permease family protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LDS4_9FIRM
Xanthine/uracil permease family protein {ECO:0000313|EMBL:CCY75594.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
Permeases
L3_068_000M1_scaffold_2642_12
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13727..14098)
DNA (372bp) protein (124aa)
Putative endoribonuclease L-PSP n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKJ2_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CDB13793.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
endoribonuclease L-PSP, putative
L3_068_000M1_scaffold_2642_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14281..14988
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5THQ4_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ58521.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
putative ABC transporter ATP-binding protein TM_0352
L3_068_000M1_scaffold_2642_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15003..17930
DNA (2928bp) protein (976aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z065_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EGB92486.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_068_000M1_scaffold_2642_15
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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18017..18694
DNA (678bp) protein (226aa)
Predicted double-stranded RNA/RNA-DNA hybrid binding protein (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N1B5_9FIRM
Ribonuclease HI {ECO:0000313|EMBL:CDF06341.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Displaying 15 items

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