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L3_068_000M1_scaffold_2768

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2768_1
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(184..687)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AR08_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58130.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
preprotein translocase subunit SecA
L3_068_000M1_scaffold_2768_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(825..1562)
DNA (738bp) protein (246aa)
Adapter protein MecA 2 family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LIJ8_9FIRM
Adapter protein MecA 2 family protein {ECO:0000313|EMBL:EET59580.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
negative regulator of genetic competence
L3_068_000M1_scaffold_2768_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2131..4005
DNA (1875bp) protein (625aa)
Uncharacterized protein n=2 Tax=root RepID=R5HJ02_9FIRM
Predicted glycosyl hydrolase
Uncharacterized protein {ECO:0000313|EMBL:CCY29513.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_068_000M1_scaffold_2768_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4096..4845
DNA (750bp) protein (250aa)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Y2_CLOSW
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:ADL02972.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_068_000M1_scaffold_2768_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4886..5947
DNA (1062bp) protein (354aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B5F579
Sua5/YciO/YrdC/YwlC family protein
L3_068_000M1_scaffold_2768_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6006..7709
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75880.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_068_000M1_scaffold_2768_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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7657..8646
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6V3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77347.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_068_000M1_scaffold_2768_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8694..9332
DNA (639bp) protein (213aa)
Response regulator receiver domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D0M0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX73723.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_068_000M1_scaffold_2768_9
unknown

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9369..10880
DNA (1512bp) protein (504aa)

This feature has no annotations

L3_068_000M1_scaffold_2768_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11839..13917
DNA (2079bp) protein (693aa)
Glycogen debranching enzyme n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KKX2_CLOPH
glycogen debranching protein
Glycogen debranching enzyme {ECO:0000313|EMBL:ABX42704.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_068_000M1_scaffold_2768_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13914..14198
DNA (285bp) protein (95aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Endonuclease III n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G1P8_9FIRM
Predicted EndoIII-related endonuclease
Displaying 11 items

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