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L3_068_000M1_scaffold_3428

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3428_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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586..1989
DNA (1404bp) protein (468aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CD13_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Na+-dependent transporters of the SNF family
L3_068_000M1_scaffold_3428_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2079..3506)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32284.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
aspartate ammonia-lyase
L3_068_000M1_scaffold_3428_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3743..4693
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRV3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY32460.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
LysR family transcriptional regulator
L3_068_000M1_scaffold_3428_4
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4757..6250
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JU36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66307.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
type 1 dockerin
L3_068_000M1_scaffold_3428_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6296..7096
DNA (801bp) protein (267aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGJ7_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFQ07683.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Short-chain dehydrogenases of various substrate specificities
L3_068_000M1_scaffold_3428_6
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7101..7484)
DNA (384bp) protein (128aa)
Lactoylglutathione lyase and related lyases n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JEB4_9FIRM
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CCY52933.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Lactoylglutathione lyase and related lyases
L3_068_000M1_scaffold_3428_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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7733..7987
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SBN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43997.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
HicA protein
L3_068_000M1_scaffold_3428_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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7984..8331
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43999.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters
L3_068_000M1_scaffold_3428_9
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8748..8972)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HSF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO17638.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
hypothetical protein
L3_068_000M1_scaffold_3428_10
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

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comp(8969..9457)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CRN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX67387.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L3_068_000M1_scaffold_3428_11
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

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comp(9454..9669)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CI28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX67388.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L3_068_000M1_scaffold_3428_12
unknown

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comp(9998..10240)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_068_000M1_scaffold_3428_13
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10221..10802)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium Aus0085 RepID=S5VUK9_ENTFC
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03369.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L3_068_000M1_scaffold_3428_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10799..11020)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FXF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09760.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_068_000M1_scaffold_3428_15
unknown

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comp(11419..11496)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 15 items

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