ggKbase home page

L3_068_000M1_scaffold_3763

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3763_1
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1704
DNA (1704bp) protein (568aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJF8_9CLOT
L3_068_000M1_scaffold_3763_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1817..3748
DNA (1932bp) protein (644aa)
UvrABC system protein C n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNV8_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
excinuclease ABC, C subunit
L3_068_000M1_scaffold_3763_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3778..4710
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
HPr kinase/phosphorylase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XG97_9CLOT
HPr kinase
L3_068_000M1_scaffold_3763_4
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4710..5657
DNA (948bp) protein (316aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000309B2A6
L3_068_000M1_scaffold_3763_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5679..6551
DNA (873bp) protein (291aa)
UPF0042 nucleotide-binding protein BN814_00233 n=2 Tax=Firmicutes RepID=R5BLJ3_9FIRM
Nucleotide-binding protein DORFOR_01106 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Predicted P-loop-containing kinase
L3_068_000M1_scaffold_3763_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6535..7518
DNA (984bp) protein (328aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IEL5_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_068_000M1_scaffold_3763_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7515..7790
DNA (276bp) protein (92aa)
HPr family phosphocarrier n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XRZ4_9CLOT
HPr family phosphocarrier {ECO:0000313|EMBL:ENY98688.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
phosphotransferase system, phosphocarrier protein HPr
L3_068_000M1_scaffold_3763_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7855..8478)
DNA (624bp) protein (208aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HX04_9FIRM
L3_068_000M1_scaffold_3763_9
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

8722..10479
DNA (1758bp) protein (586aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6C0L6_9FIRM
Displaying 9 items

View Taxonomy