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L3_068_000M1_scaffold_1321

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1321_1
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..557
DNA (555bp) protein (185aa)
Putative two-component response regulator n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PLD7_9FIRM
Putative two-component response regulator {ECO:0000313|EMBL:CDC10522.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
AraC family transcriptional regulator
L3_068_000M1_scaffold_1321_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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848..2458
DNA (1611bp) protein (537aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B0X5_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI71794.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter substrate-binding protein
L3_068_000M1_scaffold_1321_3
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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2565..3491
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=2 Tax=Lachnospiraceae RepID=C9L4R9_BLAHA
ABC transporter permease protein {ECO:0000313|EMBL:CDC10513.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
protein lplB
L3_068_000M1_scaffold_1321_4
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3522..4415
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=2 Tax=Lachnospiraceae RepID=C9L4R8_BLAHA
ABC transporter, permease protein {ECO:0000313|EMBL:EEX22752.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
sugar ABC transporter permease
L3_068_000M1_scaffold_1321_5
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4441..5796
DNA (1356bp) protein (452aa)
Arylsulfatase {ECO:0000313|EMBL:EEX22751.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEX22751.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
yidJ; sulfatase yidj (EC:3.1.6.-)
Arylsulfatase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4R7_BLAHA
L3_068_000M1_scaffold_1321_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5839..7296
DNA (1458bp) protein (486aa)
Arylsulfatase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B2Q4_9CLOT
Arylsulfatase {ECO:0000313|EMBL:ERI66500.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
N-acetylgalactosamine 6-sulfate sulfatase
L3_068_000M1_scaffold_1321_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7351..8550
DNA (1200bp) protein (400aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:EFB77582.1}; EC=1.1.99.- {ECO:0000313|EMBL:EFB77582.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Anaerobic sulfatase maturase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIB4_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_068_000M1_scaffold_1321_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8620..10602)
DNA (1983bp) protein (661aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Eubacterium RepID=C0EU37_9FIRM
L3_068_000M1_scaffold_1321_9
unknown

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10874..12157
DNA (1284bp) protein (428aa)

This feature has no annotations

L3_068_000M1_scaffold_1321_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12254..13111)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSF8_CLOPH
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABX43610.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_068_000M1_scaffold_1321_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13462..15228
DNA (1767bp) protein (589aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS07_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL09659.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_1321_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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15228..17018
DNA (1791bp) protein (597aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW76_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCY21620.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ABC-type multidrug transport system, ATPase and permease components
L3_068_000M1_scaffold_1321_13
unknown

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17126..18214
DNA (1089bp) protein (363aa)

This feature has no annotations

L3_068_000M1_scaffold_1321_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18392..19987
DNA (1596bp) protein (532aa)
ATP-dependent transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJY3_9FIRM
ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:CBL10663.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_1321_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20018..20767
DNA (750bp) protein (250aa)
ATP-dependent transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJY3_9FIRM
ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:CBL10663.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000M1_scaffold_1321_16
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20764..21744)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J7P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30215.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_068_000M1_scaffold_1321_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21763..22929)
DNA (1167bp) protein (389aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3F7_9FIRM
probable hydroxymethylpyrimidine transporter CytX
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CBL25769.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_068_000M1_scaffold_1321_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22932..23741)
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CBL25770.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CBL25770.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphomethylpyrimidine kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3F8_9FIRM
L3_068_000M1_scaffold_1321_19
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23816..24454)
DNA (639bp) protein (213aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Thiamine-phosphate synthase n=1 Tax=Coprococcus catus GD/7 RepID=D4JBB6_9FIRM
L3_068_000M1_scaffold_1321_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24441..25262)
DNA (822bp) protein (274aa)
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Hydroxyethylthiazole kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4JBB5_9FIRM
L3_068_000M1_scaffold_1321_21
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25525..26943)
DNA (1419bp) protein (473aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L-arabinose isomerase (EC:5.3.1.4)
arabinose isomerase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F4DF0B
L3_068_000M1_scaffold_1321_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27228..27416
DNA (189bp) protein (63aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CBL19820.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL19820.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Capsular polysaccharide biosynthesis protein n=3 Tax=Clostridiales RepID=D4LJ09_9FIRM
Displaying 22 items

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