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L3_068_000M1_scaffold_1929

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1929_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(3..575)
DNA (573bp) protein (191aa)
UPF0210 protein BN708_01422 n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BT19_9FIRM
UPF0210 protein BN708_01422 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_068_000M1_scaffold_1929_2
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(737..1009)
DNA (273bp) protein (91aa)
UPF0237 protein C807_00804 n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JLQ6_9FIRM
UPF0237 protein C807_00804 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ACT domain-containing protein
L3_068_000M1_scaffold_1929_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1081..1878)
DNA (798bp) protein (266aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZET7_9CLOT
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:CDD39476.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_068_000M1_scaffold_1929_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2144..4318
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTA1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98821.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
alpha-L-rhamnosidase
L3_068_000M1_scaffold_1929_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4397..4990)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FWJ6_9FIRM
L3_068_000M1_scaffold_1929_6
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5003..7834)
DNA (2832bp) protein (944aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:ABX43163.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABX43163.1};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
DNA polymerase I n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNZ3_CLOPH
L3_068_000M1_scaffold_1929_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7857..8192)
DNA (336bp) protein (112aa)
Transmembrane anti-sigma factor n=3 Tax=Clostridium bolteae RepID=R0AR10_9CLOT
Transmembrane anti-sigma factor {ECO:0000313|EMBL:ENZ34522.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_068_000M1_scaffold_1929_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(8211..9395)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AD69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40653.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Phosphoribosylamine-glycine ligase
L3_068_000M1_scaffold_1929_9
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(9424..10104)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AD87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX39100.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
putative SanA protein
L3_068_000M1_scaffold_1929_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10199..10840)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=2 Tax=Clostridium RepID=D3APK3_9CLOT
L3_068_000M1_scaffold_1929_11
Streptococcus sinensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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11170..12264
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00035ECB2D
Putative endonuclease {ECO:0000313|EMBL:KGM37718.1}; TaxID=176090 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sinensis.;"
GTPase subunit of restriction endonuclease
L3_068_000M1_scaffold_1929_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12342..13715
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97897.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
McrBC 5-methylcytosine restriction system component
L3_068_000M1_scaffold_1929_13
unknown

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comp(13728..14456)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B56FF7
L3_068_000M1_scaffold_1929_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14472..15245)
DNA (774bp) protein (258aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase n=2 Tax=Roseburia RepID=R5HTY8_9FIRM
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CCY31569.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_068_000M1_scaffold_1929_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15300..15761)
DNA (462bp) protein (154aa)
ADP-ribose pyrophosphatase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWP9_9CLOT
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDD40458.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
NUDIX hydrolase
L3_068_000M1_scaffold_1929_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15866..17509)
DNA (1644bp) protein (548aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DII9_CLOSC
Cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBK77513.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_068_000M1_scaffold_1929_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17478..18818)
DNA (1341bp) protein (447aa)
Cell cycle protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R363_CLOSW
cell cycle protein
Cell cycle protein {ECO:0000313|EMBL:ADL04812.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_068_000M1_scaffold_1929_18
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18862..19074)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P4G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04576.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
L3_068_000M1_scaffold_1929_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19100..19984)
DNA (885bp) protein (295aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42508.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying 19 items

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