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L3_068_000M1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_111_1
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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135..1694
DNA (1560bp) protein (520aa)
Sigma-70 region 2 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZC7_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDC11626.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
RNA polymerase sigma factor, sigma-70 family
L3_068_000M1_scaffold_111_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1718..2140
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NTC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11624.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_068_000M1_scaffold_111_3
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2137..2382
DNA (246bp) protein (82aa)
Lysophospholipase L1-like esterase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPD5_9FIRM
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:CDC11622.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Listeria/Bacterioides repeat
L3_068_000M1_scaffold_111_4
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2530..2856
DNA (327bp) protein (109aa)
Large-conductance mechanosensitive channel n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YN50_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
large conductance mechanosensitive channel protein
L3_068_000M1_scaffold_111_5
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2916..3863
DNA (948bp) protein (316aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
tRNA-dihydrouridine synthase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK90_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
L3_068_000M1_scaffold_111_6
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5355..6188
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK77_9FIRM
L3_068_000M1_scaffold_111_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6278..6940
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11603.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_111_8
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6943..7779)
DNA (837bp) protein (279aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK74_9FIRM
L3_068_000M1_scaffold_111_9
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7776..8378)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11598.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Predicted membrane protein
L3_068_000M1_scaffold_111_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8535..10103
DNA (1569bp) protein (523aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZA4_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDC11596.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
methyl-accepting chemotaxis protein
L3_068_000M1_scaffold_111_11
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10135..11352
DNA (1218bp) protein (406aa)
Putative dGTPase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NT99_9FIRM
Putative dGTPase {ECO:0000313|EMBL:CDC11594.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
phosphohydrolase
L3_068_000M1_scaffold_111_12
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11353..11706)
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPB3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC11592.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
helix-turn-helix domain-containing protein
L3_068_000M1_scaffold_111_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11826..12554)
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK65_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDC11590.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
3-oxoacyl-[acyl-carrier-protein] reductase
L3_068_000M1_scaffold_111_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12829..13356
DNA (528bp) protein (176aa)
SSU ribosomal protein S30P/sigma 54 modulation protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHI2_9FIRM
SSU ribosomal protein S30P/sigma 54 modulation protein {ECO:0000313|EMBL:CDC11588.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L3_068_000M1_scaffold_111_15
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13564..14451
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPA9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC11587.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
transcriptional regulator
L3_068_000M1_scaffold_111_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14552..15607
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZ97_9FIRM
L3_068_000M1_scaffold_111_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15629..17005
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK61_9FIRM
L3_068_000M1_scaffold_111_18
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17134..17868)
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NT93_9FIRM
L3_068_000M1_scaffold_111_19
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18012..18449
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11583.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_111_20
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18533..18775
DNA (243bp) protein (81aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPA6_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC11582.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_111_21
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18837..20396
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZ94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11581.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
LysM domain.
L3_068_000M1_scaffold_111_22
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20446..21672
DNA (1227bp) protein (409aa)
NlpC/P60 family protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK56_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDC11580.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_068_000M1_scaffold_111_23
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21807..22244
DNA (438bp) protein (146aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NT89_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC11579.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_111_24
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22253..22918
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11578.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_111_25
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22936..23811
DNA (876bp) protein (292aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPA1_9FIRM
L3_068_000M1_scaffold_111_26
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23828..24460)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZ91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11576.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Predicted membrane protein
L3_068_000M1_scaffold_111_27
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24457..24927)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NT86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11574.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_068_000M1_scaffold_111_28
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25032..26147)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11572.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Glycosyltransferase Family 28-like b-glycosyltransferase
L3_068_000M1_scaffold_111_29
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26346..26870
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK47_9FIRM
L3_068_000M1_scaffold_111_30
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26950..27273
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11568.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
MFS transporter xanthine/uracil permease
Displaying items 1-30 of 138 in total

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