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L3_068_000M1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_125_1
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..3075)
DNA (3075bp) protein (1025aa)
Glycosidases n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMW7_9FIRM
Glycosidases {ECO:0000313|EMBL:CDC12570.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Glycosidases
L3_068_000M1_scaffold_125_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3366..4436)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12569.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
transcriptional regulator, CdaR family
L3_068_000M1_scaffold_125_3
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4548..5660)
DNA (1113bp) protein (371aa)
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system ATPase component n=1 Tax=Roseburia sp. CAG:45 RepID=R6NKA7_9FIRM
ABC-type sugar/spermidine/putrescine/iron/thiamine transport system ATPase component {ECO:0000313|EMBL:CDC12568.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
sugar/spermidine/putrescine/iron/thiamine ABC transporter ATPase
L3_068_000M1_scaffold_125_4
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5890..6531)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PS30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12567.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_068_000M1_scaffold_125_5
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6556..6990)
DNA (435bp) protein (145aa)
DeoxyUTP pyrophosphatase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NW11_9FIRM
DeoxyUTP pyrophosphatase {ECO:0000313|EMBL:CDC12564.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
deoxyUTP pyrophosphatase
L3_068_000M1_scaffold_125_6
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7013..8023)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Roseburia sp. CAG:45 RepID=R6P259_9FIRM
L3_068_000M1_scaffold_125_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8039..8695)
DNA (657bp) protein (219aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NKA0_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_8
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8700..10046)
DNA (1347bp) protein (449aa)
GTPase Der n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMV3_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ribosome-associated GTPase EngA
L3_068_000M1_scaffold_125_9
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10015..11343)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12553.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L3_068_000M1_scaffold_125_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11433..13346)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P252_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12551.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_11
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13321..14220)
DNA (900bp) protein (300aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Roseburia sp. CAG:45 RepID=R6NW02_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDC12549.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ABC-type multidrug transport system, ATPase component
L3_068_000M1_scaffold_125_12
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14204..14590)
DNA (387bp) protein (129aa)
Transcriptional regulator GntR family n=1 Tax=Roseburia sp. CAG:45 RepID=R6PS13_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDC12547.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
transcriptional regulator, GntR family
L3_068_000M1_scaffold_125_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14841..15422)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12545.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
methyl-accepting chemotaxis protein
L3_068_000M1_scaffold_125_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15508..16368)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PS09_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_15
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16466..16867)
DNA (402bp) protein (134aa)
UPF0102 protein BN662_00238 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NVZ4_9FIRM
UPF0102 protein BN662_00238 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
conserved hypothetical protein TIGR00252
L3_068_000M1_scaffold_125_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16939..17265)
DNA (327bp) protein (109aa)
Flagellar biosynthesis n=1 Tax=Roseburia sp. CAG:45 RepID=R6P241_9FIRM
Flagellar biosynthesis {ECO:0000313|EMBL:CDC12536.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB
L3_068_000M1_scaffold_125_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17269..18981)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NVZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12534.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Flagellar hook-length control protein FliK.
L3_068_000M1_scaffold_125_18
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19020..19790)
DNA (771bp) protein (257aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Roseburia sp. CAG:45 RepID=R6PS03_9FIRM
L3_068_000M1_scaffold_125_19
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19826..20407)
DNA (582bp) protein (194aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Roseburia sp. CAG:45 RepID=R6P237_9FIRM
L3_068_000M1_scaffold_125_20
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20438..21289)
DNA (852bp) protein (284aa)
Ribosome biogenesis GTPase A n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMT5_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ribosome biogenesis GTP-binding protein YlqF
L3_068_000M1_scaffold_125_21
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21320..21907)
DNA (588bp) protein (196aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Signal peptidase I n=1 Tax=Roseburia sp. CAG:45 RepID=R6NVY7_9FIRM
signal peptidase I
L3_068_000M1_scaffold_125_22
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22133..22486)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK73_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ribosomal protein L19, bacterial type
L3_068_000M1_scaffold_125_23
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22602..23657)
DNA (1056bp) protein (352aa)
Type IV pilus retraction protein PilT n=1 Tax=Roseburia sp. CAG:45 RepID=R6PRZ8_9FIRM
Type IV pilus retraction protein PilT {ECO:0000313|EMBL:CDC12527.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
pilus retraction protein PilT
L3_068_000M1_scaffold_125_24
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23677..24168)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P234_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12526.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_25
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24161..24616)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12525.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_068_000M1_scaffold_125_26
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24627..25115)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12523.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_27
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25133..25480)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P231_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12521.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_125_28
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25494..26546)
DNA (1053bp) protein (351aa)
Bacterial type II secretion system domain protein F n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMS7_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:CDC12520.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Type II secretory pathway, component PulF
L3_068_000M1_scaffold_125_29
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26562..27533)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12518.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_068_000M1_scaffold_125_30
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27544..28068)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P229_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12516.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
Displaying items 1-30 of 149 in total

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