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L3_068_000M1_scaffold_659

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_659_1
unknown

Not on your lists

132..578
DNA (447bp) protein (149aa)

This feature has no annotations

L3_068_000M1_scaffold_659_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

620..1483
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NQ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13415.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
TraX protein
L3_068_000M1_scaffold_659_3
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1948..3111
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EC56_9FIRM
Tax=BJP_IG2157_Clostridiales_52_13
L3_068_000M1_scaffold_659_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

3168..4394
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98101.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component
L3_068_000M1_scaffold_659_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

4399..5298
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98099.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sugar ABC transporter permease
L3_068_000M1_scaffold_659_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

5300..6142
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F7S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98097.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L3_068_000M1_scaffold_659_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

6160..7968
DNA (1809bp) protein (603aa)
cyclomaltodextrinase (EC:3.2.1.54)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98096.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_068_000M1_scaffold_659_8
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

8056..9060
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A333_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47766.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
alanine racemase
L3_068_000M1_scaffold_659_9
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9235..11229)
DNA (1995bp) protein (665aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NYB6_9FIRM
L3_068_000M1_scaffold_659_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11622..12275)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13413.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_068_000M1_scaffold_659_11
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12469..13287)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PUF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13412.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_068_000M1_scaffold_659_12
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13447..15018
DNA (1572bp) protein (524aa)
Sodium:proline symporter n=1 Tax=Roseburia sp. CAG:45 RepID=R6P4J4_9FIRM
Sodium:proline symporter {ECO:0000313|EMBL:CDC13411.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
putP; sodium/proline symporter
L3_068_000M1_scaffold_659_13
unknown

Not on your lists

15057..15236
DNA (180bp) protein (60aa)

This feature has no annotations

L3_068_000M1_scaffold_659_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15429..15740
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NQ88_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rpsJ; 30S ribosomal protein S10
L3_068_000M1_scaffold_659_15
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15833..16516
DNA (684bp) protein (228aa)
50S ribosomal protein L3 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NYB0_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rplC; 50S ribosomal protein L3
L3_068_000M1_scaffold_659_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16544..17164
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMI1_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rplD; 50S ribosomal protein L4
L3_068_000M1_scaffold_659_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17164..17463
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Roseburia sp. CAG:45 RepID=R6PUF3_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Ribosomal protein L23
L3_068_000M1_scaffold_659_18
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17532..18374
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Roseburia sp. CAG:45 RepID=R6P4I9_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
LSU ribosomal protein L2P
L3_068_000M1_scaffold_659_19
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18393..18674
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NQ82_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
SSU ribosomal protein S19P
L3_068_000M1_scaffold_659_20
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18702..19088
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NYA6_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
LSU ribosomal protein L22P
L3_068_000M1_scaffold_659_21
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19099..19755
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMH5_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
SSU ribosomal protein S3P
L3_068_000M1_scaffold_659_22
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19755..20192
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Roseburia sp. CAG:45 RepID=R6PUE5_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rplP; 50S ribosomal protein L16
L3_068_000M1_scaffold_659_23
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20182..20391
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Roseburia sp. CAG:45 RepID=R6P4I3_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
50S ribosomal protein L29
L3_068_000M1_scaffold_659_24
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20456..20713
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NQ78_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
30S ribosomal protein S17
L3_068_000M1_scaffold_659_25
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20732..21100
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NY99_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
50S ribosomal protein L14
L3_068_000M1_scaffold_659_26
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21114..21425
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMG9_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
LSU ribosomal protein L24P
L3_068_000M1_scaffold_659_27
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21450..21989
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Roseburia sp. CAG:45 RepID=R6PUD9_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
rplE; 50S ribosomal protein L5
L3_068_000M1_scaffold_659_28
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22007..22192
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Roseburia sp. CAG:45 RepID=R6P4H8_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Ribosomal protein S14
L3_068_000M1_scaffold_659_29
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22308..22712
DNA (405bp) protein (135aa)
30S ribosomal protein S8 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NQ72_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Ribosomal protein S8
L3_068_000M1_scaffold_659_30
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22903..23442
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Roseburia sp. CAG:45 RepID=R6NY94_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
LSU ribosomal protein L6P
Displaying items 1-30 of 76 in total

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