ggKbase home page

L3_068_243G1_scaffold_3922

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_3922_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..90
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK81_BIFBR
transposase
Integrase core domain-containing protein {ECO:0000313|EMBL:EFV36343.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_068_243G1_scaffold_3922_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169..1500
DNA (1332bp) protein (444aa)
PF03235 family protein n=3 Tax=Bifidobacterium RepID=I3B522_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44444.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_243G1_scaffold_3922_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1558..1890
DNA (333bp) protein (111aa)
UPF0145 protein BLD_1357 n=16 Tax=Bifidobacterium RepID=Y1357_BIFLD
hypothetical protein
UPF0145 protein BLIG_00571 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_243G1_scaffold_3922_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1809..2699)
DNA (891bp) protein (297aa)
Membrane protein hemolysin III like protein n=4 Tax=Bifidobacterium longum RepID=S3E681_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65750.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_068_243G1_scaffold_3922_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2803..3039)
DNA (237bp) protein (79aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=V6XTZ5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44446.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_243G1_scaffold_3922_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3892..4647)
DNA (756bp) protein (252aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXT4_BIFLN
L3_068_243G1_scaffold_3922_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4655..5038)
DNA (384bp) protein (128aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXT4_BIFLN
tgt; tgt
L3_068_243G1_scaffold_3922_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5455..5622
DNA (168bp) protein (56aa)
Trypsin-like serine protease n=2 Tax=Bifidobacterium longum RepID=B3DNT9_BIFLD
protease
Peptidase {ECO:0000313|EMBL:AIW43146.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying 8 items

View Taxonomy