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L3_068_243G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_47_1
unknown

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1..135
DNA (135bp) protein (45aa)

This feature has no annotations

L3_068_243G1_scaffold_47_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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439..1737
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05913.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
resolvase
L3_068_243G1_scaffold_47_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1928..3295)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002DEE2D2
Uncharacterized protein {ECO:0000313|EMBL:ENZ47970.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
transposase IS4 family protein
L3_068_243G1_scaffold_47_4
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(3511..3684)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI000316DC68
Uncharacterized protein {ECO:0000313|EMBL:CDE42495.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
L3_068_243G1_scaffold_47_5
unknown

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3935..4135
DNA (201bp) protein (67aa)

This feature has no annotations

L3_068_243G1_scaffold_47_6
unknown

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4205..4534
DNA (330bp) protein (110aa)

This feature has no annotations

L3_068_243G1_scaffold_47_7
unknown

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comp(4499..4726)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_068_243G1_scaffold_47_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5124..5516
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RKH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46646.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_068_243G1_scaffold_47_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5534..6877)
DNA (1344bp) protein (448aa)
gdh; NAD-specific glutamate dehydrogenase Gdh (EC:1.4.1.2)
Glutamate dehydrogenase n=5 Tax=Erysipelotrichaceae RepID=B0N555_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_068_243G1_scaffold_47_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7230..8750
DNA (1521bp) protein (507aa)
ImpB/MucB/SamB family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N556_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EDS18224.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_068_243G1_scaffold_47_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8747..9154
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N557_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91981.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
YolD-like protein.
L3_068_243G1_scaffold_47_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9358..9603
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QYT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31644.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_068_243G1_scaffold_47_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9638..9976
DNA (339bp) protein (113aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N559_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31643.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_068_243G1_scaffold_47_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10047..10754)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N560_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91984.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_068_243G1_scaffold_47_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10900..11130
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N561_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Helix-turn-helix.
L3_068_243G1_scaffold_47_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11296..11841
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N562_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46654.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_068_243G1_scaffold_47_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12086..12508
DNA (423bp) protein (141aa)
Sporulation initiation factor Spo0A domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N563_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33591.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
sporulation transcription factor Spo0A
L3_068_243G1_scaffold_47_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12591..13037)
DNA (447bp) protein (149aa)
Sporulation transcription factor Spo0A n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1E5_9FIRM
Sporulation transcription factor Spo0A {ECO:0000313|EMBL:EHM91988.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
stage 0 sporulation protein A
L3_068_243G1_scaffold_47_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13526..14542
DNA (1017bp) protein (339aa)
ATP phosphoribosyltransferase regulatory subunit n=5 Tax=Erysipelotrichaceae RepID=B0N565_9FIRM
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
L3_068_243G1_scaffold_47_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14535..15164
DNA (630bp) protein (210aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATP phosphoribosyltransferase n=2 Tax=Erysipelotrichaceae RepID=B0N566_9FIRM
hisG; ATP phosphoribosyltransferase
L3_068_243G1_scaffold_47_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15164..16462
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Histidinol dehydrogenase n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AJ66_9FIRM
hisD; Histidinol dehydrogenase
L3_068_243G1_scaffold_47_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16465..17052
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Coprobacillus RepID=C3RKI9_9FIRM
L3_068_243G1_scaffold_47_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17072..17680
DNA (609bp) protein (203aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Erysipelotrichaceae RepID=B0N569_9FIRM
hisH; Imidazole glycerol phosphate synthase subunit HisH
L3_068_243G1_scaffold_47_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17674..18399
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Coprobacillus RepID=C3RKJ1_9FIRM
L3_068_243G1_scaffold_47_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18381..19145
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hisF; imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QT75_9FIRM
L3_068_243G1_scaffold_47_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19145..19783
DNA (639bp) protein (213aa)
Histidine biosynthesis bifunctional protein HisIE n=3 Tax=Erysipelotrichaceae RepID=B0N572_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hisI; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
L3_068_243G1_scaffold_47_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19785..20570
DNA (786bp) protein (262aa)
Histidinol-phosphatase (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family protein n=3 Tax=Erysipelotrichaceae RepID=G9R1F4_9FIRM
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:EHM91997.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_068_243G1_scaffold_47_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20629..21003
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N574_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18242.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_068_243G1_scaffold_47_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21003..22169
DNA (1167bp) protein (389aa)
Cation diffusion facilitator family transporter n=2 Tax=Coprobacillus RepID=C3RKJ6_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EHQ46667.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cation diffusion facilitator family transporter
L3_068_243G1_scaffold_47_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22204..23376)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N576_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46668.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
natB; Na+ ABC transporter NATB
Displaying items 1-30 of 120 in total

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