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L3_068_243G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_111_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(437..1132)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57201.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_243G1_scaffold_111_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1261..1809)
DNA (549bp) protein (183aa)
Putative collagen triple helix repeat protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57202.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
collagen triple helix repeat-containing protein
L3_068_243G1_scaffold_111_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2470..2952
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C6U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34959.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_111_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2968..4011
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YR77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI79742.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_111_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4024..5202
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DJA5_9CLOT
histidine kinase
L3_068_243G1_scaffold_111_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5159..5875
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C989_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34962.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GCN5-related N-acetyltransferase
L3_068_243G1_scaffold_111_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5967..7742)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34963.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
myosin-crossreactive antigen
L3_068_243G1_scaffold_111_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7866..8456)
DNA (591bp) protein (197aa)
Putative dihydroxyacetone kinase regulator n=3 Tax=Clostridiales RepID=G9YQ23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34964.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TetR family transcriptional regulator
L3_068_243G1_scaffold_111_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8460..9827)
DNA (1368bp) protein (456aa)
Citrate synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C992_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Citrate synthase
L3_068_243G1_scaffold_111_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9970..10986
DNA (1017bp) protein (339aa)
Stage II sporulation protein D n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ25_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:KGF57174.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIID; stage II sporulation protein D
L3_068_243G1_scaffold_111_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11227..11883)
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2CDE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34967.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_111_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11855..12346)
DNA (492bp) protein (164aa)
Sigma-70 region 2 n=3 Tax=Clostridiales RepID=G9YUQ1_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34968.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase subunit sigma-24
L3_068_243G1_scaffold_111_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12533..13927
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2B4X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67265.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_111_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14081..14377
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM41825.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_243G1_scaffold_111_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14584..15411
DNA (828bp) protein (276aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Purine nucleoside phosphorylase n=2 Tax=Clostridiales RepID=G9YUP6_9FIRM
purine nucleoside phosphorylase I
L3_068_243G1_scaffold_111_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15424..16725
DNA (1302bp) protein (434aa)
Amidohydrolase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUP5_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:EHM41823.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Cytosine deaminase and related metal-dependent hydrolases
L3_068_243G1_scaffold_111_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..18498
DNA (1761bp) protein (587aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CIZ6_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERI67296.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
polysaccharide biosynthesis protein
L3_068_243G1_scaffold_111_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18536..19324
DNA (789bp) protein (263aa)
MazG family protein n=2 Tax=Clostridiales RepID=H1C9A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57182.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
yabN; putative protein YabN
L3_068_243G1_scaffold_111_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19394..19669
DNA (276bp) protein (92aa)
DNA-binding protein HU-alpha n=3 Tax=Clostridiales RepID=G9YUP2_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:KGF57183.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hup; DNA-binding protein HU
L3_068_243G1_scaffold_111_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20500..20742
DNA (243bp) protein (81aa)
S4 domain protein n=3 Tax=Clostridiales RepID=G9YUP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34872.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_243G1_scaffold_111_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20817..21278)
DNA (462bp) protein (154aa)
S1 RNA binding domain protein n=4 Tax=Clostridiales RepID=G9YUP0_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EHM41856.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_068_243G1_scaffold_111_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21285..21560)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34874.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
septum formation initiator family protein
L3_068_243G1_scaffold_111_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22055..22345)
DNA (291bp) protein (97aa)
Sporulation protein YabP n=3 Tax=Clostridiales RepID=G9YUN8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EHO34875.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_243G1_scaffold_111_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22416..22955)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34876.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_243G1_scaffold_111_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23082..24083
DNA (1002bp) protein (334aa)
birA; transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Clostridiales RepID=G9YUN6_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_243G1_scaffold_111_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24193..25281
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BU71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75368.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted membrane protein, putative toxin regulator
L3_068_243G1_scaffold_111_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25416..25763
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BB58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75369.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_243G1_scaffold_111_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25959..29129
DNA (3171bp) protein (1057aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57158.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Sel1 repeat protein
L3_068_243G1_scaffold_111_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29211..29774)
DNA (564bp) protein (188aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B4_9FIRM
L3_068_243G1_scaffold_111_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29835..31379)
DNA (1545bp) protein (515aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=2 Tax=Clostridiales RepID=G9YPM7_9FIRM
Displaying items 1-30 of 63 in total

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