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L3_068_243G1_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_118_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1020
DNA (1020bp) protein (340aa)
Putative membrane protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56791.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_243G1_scaffold_118_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1045..2499)
DNA (1455bp) protein (485aa)
Transporter n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2A666_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_118_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2581..2853)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56793.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_243G1_scaffold_118_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3100..4398)
DNA (1299bp) protein (433aa)
lpd; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE0_9FIRM
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:KGF56794.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_243G1_scaffold_118_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4402..5823)
DNA (1422bp) protein (474aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE1_9FIRM
glycine dehydrogenase subunit beta
L3_068_243G1_scaffold_118_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5820..7127)
DNA (1308bp) protein (436aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvPA; glycine cleavage system P protein subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6S2_9CLOT
L3_068_243G1_scaffold_118_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7129..7509)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE4_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gcvH; glycine cleavage system H protein
L3_068_243G1_scaffold_118_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7592..8656)
DNA (1065bp) protein (355aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D2T3_9CLOT
L3_068_243G1_scaffold_118_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8930..9535)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BPV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73848.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_118_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9939..10622)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BNP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33085.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_118_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10775..12181)
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56802.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dipeptidase
L3_068_243G1_scaffold_118_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12186..12833)
DNA (648bp) protein (216aa)
YheO-like protein n=2 Tax=Clostridiales RepID=G9YU73_9FIRM
YheO-like protein {ECO:0000313|EMBL:ERI73852.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
YheO domain-containing protein
L3_068_243G1_scaffold_118_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12956..13477
DNA (522bp) protein (174aa)
3H domain protein n=2 Tax=Clostridiales RepID=U2BPV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33088.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_243G1_scaffold_118_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13620..15281
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56805.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transporter, NhaC family (TC 2.A.35)
L3_068_243G1_scaffold_118_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15499..17163
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33090.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transporter, NhaC family (TC 2.A.35)
L3_068_243G1_scaffold_118_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17223..18362)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42683.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_068_243G1_scaffold_118_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18378..19778)
DNA (1401bp) protein (467aa)
MBOAT family protein n=2 Tax=Clostridiales RepID=U2D2S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33092.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
membrane bound O-acyl transferase MBOAT family protein
L3_068_243G1_scaffold_118_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19860..20570)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CX85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73842.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_118_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20705..22198)
DNA (1494bp) protein (498aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YPR5_9FIRM
signal transduction histidine kinase
L3_068_243G1_scaffold_118_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22214..22702)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56811.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_243G1_scaffold_118_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22699..23391)
DNA (693bp) protein (231aa)
Response regulator ArlR n=2 Tax=Clostridiales RepID=G9YPR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33096.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_068_243G1_scaffold_118_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23404..24054)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33097.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
translation elongation factor Ts
L3_068_243G1_scaffold_118_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24375..25550
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33098.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_118_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25616..26782
DNA (1167bp) protein (389aa)
Cysteine desulfurase family protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL50_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:ERI72960.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cysteine desulfurase
L3_068_243G1_scaffold_118_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26858..27406
DNA (549bp) protein (183aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YPT8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI74977.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L3_068_243G1_scaffold_118_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27448..28389)
DNA (942bp) protein (314aa)
Carbamate kinase n=2 Tax=Clostridiales RepID=G9YPT7_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ArcC; carbamate kinase
L3_068_243G1_scaffold_118_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28440..29039
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32922.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_118_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28942..30138)
DNA (1197bp) protein (399aa)
Putative carbamoyltransferase YgeW n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA08_9CLOT
Putative carbamoyltransferase YgeW {ECO:0000313|EMBL:ERI74974.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_118_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30234..31646)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32924.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ArgE; acetylornithine deacetylase
L3_068_243G1_scaffold_118_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31869..33083)
DNA (1215bp) protein (405aa)
Diaminopropionate ammonia-lyase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI5_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EHO32925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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