ggKbase home page

L3_068_243G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_169_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

260..2407
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72695.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_243G1_scaffold_169_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2666..3370)
DNA (705bp) protein (235aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative translaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB7_9ACTN
L3_068_243G1_scaffold_169_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3564..4391)
DNA (828bp) protein (276aa)
HAD hydrolase family IIB n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQV7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72693.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Haloacid dehalogenase domain-containing protein hydrolase type 3
L3_068_243G1_scaffold_169_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4467..7028
DNA (2562bp) protein (854aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB5_9ACTN
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_243G1_scaffold_169_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7123..7836)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=2 Tax=Collinsella RepID=A4EBB4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72691.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_243G1_scaffold_169_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7841..9466)
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB3_9ACTN
L3_068_243G1_scaffold_169_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9578..9802)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39116.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_068_243G1_scaffold_169_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9842..11869)
DNA (2028bp) protein (676aa)
Probable potassium transport system protein kup n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB1_9ACTN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
potassium transporter
L3_068_243G1_scaffold_169_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12029..12673)
DNA (645bp) protein (215aa)
Nitroreductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB0_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:EBA39114.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nitroreductase
L3_068_243G1_scaffold_169_10
unknown

Not on your lists

comp(12759..12863)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_068_243G1_scaffold_169_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13077..15377
DNA (2301bp) protein (767aa)
Arylsulfatase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1R0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72712.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfatase
L3_068_243G1_scaffold_169_12
unknown

Not on your lists

15614..16174
DNA (561bp) protein (187aa)

This feature has no annotations

L3_068_243G1_scaffold_169_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16020..16571)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEW3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72710.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_243G1_scaffold_169_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16699..18558)
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA5_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39109.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_068_243G1_scaffold_169_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18559..20439)
DNA (1881bp) protein (627aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5V7_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35103.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_068_243G1_scaffold_169_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21316..23097)
DNA (1782bp) protein (594aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72707.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_243G1_scaffold_169_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23242..23838)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72706.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator, TetR family
L3_068_243G1_scaffold_169_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24038..24589
DNA (552bp) protein (184aa)
LemA family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72733.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LemA family protein
L3_068_243G1_scaffold_169_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25148..26200)
DNA (1053bp) protein (351aa)
Branched-chain-amino-acid transaminase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9S8_9ACTN
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KGI72732.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
branched-chain amino acid aminotransferase
L3_068_243G1_scaffold_169_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26490..27137)
DNA (648bp) protein (216aa)
SNARE-like domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72731.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_068_243G1_scaffold_169_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27274..28065
DNA (792bp) protein (264aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A396_9ACTN
L3_068_243G1_scaffold_169_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28180..30186)
DNA (2007bp) protein (669aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB96_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72729.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_068_243G1_scaffold_169_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30188..31876)
DNA (1689bp) protein (563aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB95_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39099.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_068_243G1_scaffold_169_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31912..32412)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB94_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39098.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, MarR family
L3_068_243G1_scaffold_169_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32594..32884)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EB93_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39096.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_068_243G1_scaffold_169_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33179..33700
DNA (522bp) protein (174aa)
Nitroreductase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFP6_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:CDA35379.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Nitroreductase
L3_068_243G1_scaffold_169_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33774..34193)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB90_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72724.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_243G1_scaffold_169_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34434..35651)
DNA (1218bp) protein (406aa)
Transcriptional regulator, Fis family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB89_9ACTN
Transcriptional regulator, Fis family {ECO:0000313|EMBL:EBA39093.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Fis family sigma-54 specific transcriptional regulator
L3_068_243G1_scaffold_169_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35918..36952)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35373.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_068_243G1_scaffold_169_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37146..37847
DNA (702bp) protein (234aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB87_9ACTN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EBA39091.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
GntR family transcriptional regulator
Displaying items 1-30 of 50 in total

View Taxonomy