ggKbase home page

L3_068_243G1_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_172_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
Permease of the major facilitator superfamily protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QPX3_LACRH
MFS superfamily transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEN79858.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(187..1719)
DNA (1533bp) protein (511aa)
Blue copper oxidase CueO n=4 Tax=Lactobacillus rhamnosus RepID=S5A7F2_LACRH
Blue copper oxidase CueO precursor
Multicopper oxidase {ECO:0000313|EMBL:EEN79857.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1826..2014
DNA (189bp) protein (63aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T6X4_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS48595.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_172_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2130..2771
DNA (642bp) protein (214aa)
Cation efflux family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UYP7_LACRH
cation efflux family protein
Cation transporter {ECO:0000313|EMBL:KIC98228.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2891..3223
DNA (333bp) protein (111aa)
Transcriptional regulator, ArsR family n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6AND6_LACRH
bacterial regulatory, arsR family protein
Putative transcriptional regulator {ECO:0000313|EMBL:EKS48593.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_172_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3315..4256)
DNA (942bp) protein (314aa)
ABC transporter, manganese-binding lipoprotein n=6 Tax=Lactobacillus rhamnosus RepID=C7TM23_LACRL
fimA; manganese ABC transporter substrate-binding lipoprotein
Manganese ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC98226.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4253..5146)
DNA (894bp) protein (298aa)
ABC-type Mn2+/Zn2+ transport system, permease component n=12 Tax=Lactobacillus rhamnosus RepID=B5QPW7_LACRH
mtsC; iron ABC transporter membrane protein
Manganese ABC transporter inner membrane permease protein SitD {ECO:0000313|EMBL:EKS48591.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_172_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5143..5886)
DNA (744bp) protein (248aa)
ABC transporter family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UYQ1_LACRH
ABC transporter family protein
Manganese ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC98224.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6226..6495)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=13 Tax=Lactobacillus rhamnosus RepID=B5QPW5_LACRH
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6897..7814
DNA (918bp) protein (306aa)
ABC transporter, metal ion transporter periplasmic component/surface adhesin n=8 Tax=Lactobacillus rhamnosus RepID=C7TM28_LACRL
periplasmic solute binding family protein
Metal ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC98222.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8093..8734
DNA (642bp) protein (214aa)
NAD-dependent epimerase/dehydratase n=6 Tax=Lactobacillus rhamnosus RepID=C7T6Y2_LACRG
NAD dependent epimerase/dehydratase family protein
Oxidoreductase {ECO:0000313|EMBL:AGP75113.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8862..9374)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A625_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75114.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9712..10614
DNA (903bp) protein (301aa)
Zinc ABC transporter, periplasmic-binding protein ZnuA n=4 Tax=Lactobacillus rhamnosus RepID=S5A8S5_LACRH
Zinc ABC transporter, periplasmic-binding protein ZnuA
Zinc ABC transporter, periplasmic-binding protein ZnuA {ECO:0000313|EMBL:AGP75115.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10809..10958
DNA (150bp) protein (50aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TM32_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79843.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11769..12194
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=S5A7G1_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75118.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12485..12835)
DNA (351bp) protein (117aa)
Putative fluoride ion transporter CrcB n=5 Tax=Lactobacillus rhamnosus RepID=C7TM35_LACRL
crcB-like family protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12829..13239)
DNA (411bp) protein (137aa)
Putative fluoride ion transporter CrcB n=5 Tax=Lactobacillus rhamnosus RepID=C7TM36_LACRL
crcB-like family protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13743..15257)
DNA (1515bp) protein (505aa)
Transporter, major facilitator superfamily MFS_1, oligogalacturonide n=4 Tax=Lactobacillus rhamnosus RepID=C7TM37_LACRL
major facilitator superfamily protein
MFS transporter {ECO:0000313|EMBL:KIC98216.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15895..18618
DNA (2724bp) protein (908aa)
Alpha-L-rhamnosidase n=4 Tax=Lactobacillus rhamnosus RepID=C7TM38_LACRL
alpha-L-rhamnosidase
Uncharacterized protein {ECO:0000313|EMBL:AGP75122.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18825..19799)
DNA (975bp) protein (325aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=8 Tax=Lactobacillus rhamnosus RepID=B5QRC4_LACRH
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:EEN79837.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19789..21321)
DNA (1533bp) protein (511aa)
Acyl-CoA synthetase family protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TM41_LACRL
4cl1; acyl-CoA synthetase family protein
Acyl-CoA synthetase {ECO:0000313|EMBL:KIC98213.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21272..22513)
DNA (1242bp) protein (414aa)
Acyltransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TM42_LACRL
acyltransferase
Acyltransferase {ECO:0000313|EMBL:KIC98212.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_172_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22510..23211)
DNA (702bp) protein (234aa)
ABC transporter, aliphatic sulfonates transporter ATPase component n=7 Tax=Lactobacillus rhamnosus RepID=C7TM43_LACRL
ssuB; aliphatic sulfonates transporter ATP-binding protein SsuB
Aliphatic sulfonates family ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKS50245.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_172_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23204..24022)
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TM44_LACRL
binding--dependent transport system inner membrane component family protein
Alkanesulfonates transport system permease protein {ECO:0000313|EMBL:AGP75128.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24263..24931)
DNA (669bp) protein (223aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TM45_LACRL
B3/4 domain-containing protein
B3/4 domain protein {ECO:0000313|EMBL:EEN79832.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25777..26124)
DNA (348bp) protein (116aa)
Transcriptional modulator of MazE/toxin, MazF n=5 Tax=Lactobacillus rhamnosus RepID=C7TM49_LACRL
Programmed cell death toxin MazF
Programmed cell death toxin MazF {ECO:0000313|EMBL:AGP75131.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26124..26342)
DNA (219bp) protein (73aa)
Growth regulator n=5 Tax=Lactobacillus rhamnosus RepID=S5AED7_LACRH
Growth regulator
Uncharacterized protein {ECO:0000313|EMBL:EEN79829.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_172_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26436..28271)
DNA (1836bp) protein (612aa)
ABC transporter, ATPase component/permease protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TM51_LACRL
ABC transporter ATPase/permease
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGP75133.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_172_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28258..30048)
DNA (1791bp) protein (597aa)
ABC transporter family protein n=2 Tax=Lactobacillus rhamnosus RepID=G7UYS6_LACRH
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN79827.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC transporter family protein
L3_068_243G1_scaffold_172_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30272..31456)
DNA (1185bp) protein (395aa)
Transporter, major facilitator superfamily MFS_1 n=4 Tax=Lactobacillus rhamnosus RepID=C7TM54_LACRL
MFS superfamily transporter
ABC transporter permease {ECO:0000313|EMBL:KIC98204.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 59 in total

View Taxonomy