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L3_068_243G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_178_1
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(197..556)
DNA (360bp) protein (120aa)
TIGR00156 family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A282_9PROT
TIGR00156 family protein {ECO:0000313|EMBL:CDA45928.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_243G1_scaffold_178_2
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(784..1641)
DNA (858bp) protein (286aa)
serB; phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAP2_9PROT
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:CDA45929.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_3
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(1638..5156)
DNA (3519bp) protein (1173aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Transcription-repair-coupling factor n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4H6_9PROT
transcription-repair coupling factor
L3_068_243G1_scaffold_178_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(5117..6079)
DNA (963bp) protein (321aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AHA2_9PROT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000313|EMBL:CDA45931.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
phage SPO1 DNA polymerase-like protein
L3_068_243G1_scaffold_178_5
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(6083..6535)
DNA (453bp) protein (151aa)
SSU ribosomal protein S18P alanine acetyltransferase (EC:2.3.1.-)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AXV8_9PROT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDA45932.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6544..7251)
DNA (708bp) protein (236aa)
Universal bacterial protein YeaZ n=2 Tax=Burkholderiales RepID=D9Y3U3_9BURK
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFL83639.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
peptidase M22, glycoprotease
L3_068_243G1_scaffold_178_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7293..7967)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y3U4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83640.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L3_068_243G1_scaffold_178_8
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8108..8890
DNA (783bp) protein (261aa)
Transcriptional regulatory protein OmpR n=3 Tax=Proteobacteria RepID=F3QMT5_9BURK
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:EGG51689.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
hypothetical protein
L3_068_243G1_scaffold_178_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8915..10330
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Burkholderiales RepID=D9Y3U6_9BURK
sensor histidine kinase RisS
L3_068_243G1_scaffold_178_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(10327..10818)
DNA (492bp) protein (164aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AXW5_9PROT
L3_068_243G1_scaffold_178_11
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(10811..11524)
DNA (714bp) protein (238aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A292_9PROT
L3_068_243G1_scaffold_178_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(11581..13113)
DNA (1533bp) protein (511aa)
flavocytochrome C (EC:1.3.99.1)
Fumarate reductase flavoprotein subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAQ4_9PROT
Fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CDA45939.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(13110..13736)
DNA (627bp) protein (209aa)
Response regulator receiver domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4I9_9PROT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA45940.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
nodW; nodulation protein W
L3_068_243G1_scaffold_178_14
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13729..15555)
DNA (1827bp) protein (609aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QMS9_9BURK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EGG51683.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Signal transduction histidine kinase
L3_068_243G1_scaffold_178_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(15717..16373)
DNA (657bp) protein (219aa)
Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase (EC:1.-.-.- 1.5.1.34)
Oxygen-insensitive NAD(P)H nitroreductase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAQ9_9PROT
Oxygen-insensitive NAD(P)H nitroreductase {ECO:0000313|EMBL:CDA45944.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

16574..17557
DNA (984bp) protein (328aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4J5_9PROT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CDA45945.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
NAD-dependent epimerase/dehydratase
L3_068_243G1_scaffold_178_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

17620..18405
DNA (786bp) protein (262aa)
Zinc transporter foi n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AHB6_9PROT
Zinc transporter foi {ECO:0000313|EMBL:CDA45946.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
zinc transporter, ZIP family
L3_068_243G1_scaffold_178_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(18482..19351)
DNA (870bp) protein (290aa)
Rhodanese-like protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AXX8_9PROT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
3-mercaptopyruvate sulfurtransferase
L3_068_243G1_scaffold_178_19
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19609..19899
DNA (291bp) protein (97aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Proteobacteria RepID=D9Y3V8_9BURK
xseB; exodeoxyribonuclease 7 small subunit
L3_068_243G1_scaffold_178_20
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

19906..20808
DNA (903bp) protein (301aa)
Polyprenyl synthetase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAR5_9PROT
Polyprenyl synthetase {ECO:0000313|EMBL:CDA45949.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ispA; polyprenyl synthetase
L3_068_243G1_scaffold_178_21
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

20822..22693
DNA (1872bp) protein (624aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4K3_9PROT
L3_068_243G1_scaffold_178_22
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

22709..23725
DNA (1017bp) protein (339aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AHC1_9PROT
UDP-N-acetylenolpyruvoylglucosamine reductase
L3_068_243G1_scaffold_178_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(23761..24069)
DNA (309bp) protein (103aa)
ISPpu13 transposase Orf3 n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AXY5_9PROT
ISPpu13 transposase Orf3 {ECO:0000313|EMBL:CDA45952.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24167..24448)
DNA (282bp) protein (94aa)
ISPpu13 transposase Orf3 family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A2A9_9PROT
ISPpu13 transposase Orf3 family protein {ECO:0000313|EMBL:CDA45953.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_243G1_scaffold_178_25
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24582..25499)
DNA (918bp) protein (306aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAS0_9PROT
L3_068_243G1_scaffold_178_26
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25508..26686)
DNA (1179bp) protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
acetylornithine and succinylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E6J1_9BURK
L3_068_243G1_scaffold_178_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(26860..27495)
DNA (636bp) protein (212aa)
4Fe-4S binding domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A2B4_9PROT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA45958.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
HybA; Fe-S-cluster-containing hydrogenase component 1
L3_068_243G1_scaffold_178_28
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(27499..29703)
DNA (2205bp) protein (735aa)
Molybdopterin dinucleotide binding domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A4L6_9PROT
Molybdopterin dinucleotide binding domain protein {ECO:0000313|EMBL:CDA45960.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
anaerobic dehydrogenase, typically selenocysteine-containing
L3_068_243G1_scaffold_178_29
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30135..30398)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=4 Tax=Proteobacteria RepID=D9Y3W8_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
rpsT; 30S ribosomal protein S20
L3_068_243G1_scaffold_178_30
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

30656..32206
DNA (1551bp) protein (517aa)
Integral membrane protein MviN n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AAS9_9PROT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Proposed peptidoglycan lipid II flippase MurJ
Displaying items 1-30 of 45 in total

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