ggKbase home page

L3_068_243G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_181_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46..879
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PB1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50670.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1206..1778)
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I n=4 Tax=Bacteroides RepID=Q64PA9_BACFR
DNA-3-methyladenine glycosylase I
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:BAD50672.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1977..3695
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EYB08218.1}; EC=3.1.-.- {ECO:0000313|EMBL:EYB08218.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA7_BACFR
single-stranded-DNA-specific exonuclease RecJ
L3_068_243G1_scaffold_181_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3692..5596
DNA (1905bp) protein (635aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA6_BACFR
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAD50675.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
ATP-dependent DNA helicase RecQ
L3_068_243G1_scaffold_181_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5659..6621
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50676.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_6
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6689..7924)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C6I9E3_9BACE
putative major facilitator family transporter
Putative major facilitator family transporter {ECO:0000313|EMBL:CDD38640.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_243G1_scaffold_181_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7930..9588)
DNA (1659bp) protein (553aa)
Sialidase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA3_BACFR
sialidase
Sialidase {ECO:0000313|EMBL:BAD50678.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9612..10712)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=6 Tax=Bacteroides fragilis RepID=I3HND7_BACFG
BNR repeat-like domain protein {ECO:0000313|EMBL:EXZ03958.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L3_068_243G1_scaffold_181_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10805..12265)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I9E6_9BACE
putative outer membrane protein probably involved in nutrient binding
Uncharacterized protein {ECO:0000313|EMBL:EIY92746.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_243G1_scaffold_181_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12279..15575)
DNA (3297bp) protein (1099aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA0_BACFR
putative outer membrane protein probably involved in nutrient binding
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:BAD50681.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15666..16574)
DNA (909bp) protein (303aa)
N-acetylneuraminate lyase n=10 Tax=root RepID=C6I9E8_9BACE
putative N-acetylneuraminate lyase (sialic acid lyase)
Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:BAD50682.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16780..17502)
DNA (723bp) protein (241aa)
Putative transcriptional regulator n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64P98_BACFR
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD50683.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_13
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17931..18815
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9AV61_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD38647.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative prefrenate dehydratase
L3_068_243G1_scaffold_181_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18790..19974
DNA (1185bp) protein (395aa)
Aminotransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64P96_BACFR
aminotransferase
Aminotransferase {ECO:0000313|EMBL:BAD50685.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19997..21058
DNA (1062bp) protein (354aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=13 Tax=Bacteroides RepID=I3HNE4_BACFG
putative chorismate mutase
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EKA83868.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_243G1_scaffold_181_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21074..21847
DNA (774bp) protein (258aa)
Prephenate dehydratase n=14 Tax=Bacteroides RepID=Q64P94_BACFR
putative prephenate dehydrogenase family protein
Prephenate dehydrogenase family protein {ECO:0000313|EMBL:EYE42105.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_068_243G1_scaffold_181_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21966..22226)
DNA (261bp) protein (87aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I0PZ37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE42106.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_068_243G1_scaffold_181_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22570..24597
DNA (2028bp) protein (676aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
DNA primase n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I9F5_9BACE
putative DNA primase
L3_068_243G1_scaffold_181_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24632..26224)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9F6_9BACE
putative secreted sulfatase ydeN precursor
Putative secreted sulfatase ydeN {ECO:0000313|EMBL:BAD50690.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26251..27732)
DNA (1482bp) protein (494aa)
Putative secreted sulfatase ydeN n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64P90_BACFR
putative secreted sulfatase ydeN precursor
Putative secreted sulfatase ydeN {ECO:0000313|EMBL:BAD50691.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27817..29424)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WMY9_BACF6
Uncharacterized protein {ECO:0000313|EMBL:EIY92758.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_068_243G1_scaffold_181_22
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29438..32815)
DNA (3378bp) protein (1126aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=Bacteroides RepID=D1JV93_9BACE
putative outer membrane protein probably involved in nutrient binding
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEZ24918.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_068_243G1_scaffold_181_23
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32981..33913)
DNA (933bp) protein (311aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9G0_9BACE
hypothetical protein
Putative anti-sigma factor {ECO:0000313|EMBL:CDD38664.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_243G1_scaffold_181_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33989..34567)
DNA (579bp) protein (193aa)
RNA polymerase sigma-70 factor, expansion family 1 n=13 Tax=Bacteroides RepID=C6I9G1_9BACE
putative RNA polymerase sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD50695.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34695..35279)
DNA (585bp) protein (195aa)
folE; putative GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
GTP cyclohydrolase 1 n=14 Tax=Bacteroides RepID=GCH1_BACFN
L3_068_243G1_scaffold_181_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35282..35731)
DNA (450bp) protein (150aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64P84_BACFR
hypothetical protein
Sporulation related domain protein {ECO:0000313|EMBL:EYE42116.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_068_243G1_scaffold_181_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35808..36563)
DNA (756bp) protein (252aa)
tpiA; putative triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Triosephosphate isomerase n=13 Tax=Bacteroides RepID=TPIS_BACFN
L3_068_243G1_scaffold_181_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36612..37943)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=Q64P82_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY92765.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_243G1_scaffold_181_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37933..38475)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64P81_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50700.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_243G1_scaffold_181_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38580..39461)
DNA (882bp) protein (294aa)
Peptidase, M23 family n=12 Tax=Bacteroides RepID=D1JVA1_9BACE
putative exported peptidase
LysM domain protein {ECO:0000313|EMBL:EXY82861.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Displaying items 1-30 of 39 in total

View Taxonomy