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L3_068_243G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_183_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..1179)
DNA (1179bp) protein (393aa)
ABC transporter, antimicrobial peptide transporter permease component n=8 Tax=Lactobacillus rhamnosus RepID=C7TF27_LACRL
antimicrobial peptide ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:EKS49708.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_183_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1166..1855)
DNA (690bp) protein (230aa)
ABC-type antimicrobial peptide transport system, ATPase component n=12 Tax=Lactobacillus rhamnosus RepID=B5QN28_LACRH
ABC transporter family protein
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC97782.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_183_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1848..2918)
DNA (1071bp) protein (357aa)
Periplasmic component of efflux system n=5 Tax=Lactobacillus rhamnosus RepID=S5AFJ3_LACRH
Periplasmic component of efflux system
Periplasmic component of efflux system {ECO:0000313|EMBL:AGP75577.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3296..4477)
DNA (1182bp) protein (394aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=C7TF24_LACRL
helix-turn-helix family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75576.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4489..5265)
DNA (777bp) protein (259aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TF23_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75575.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5594..5770)
DNA (177bp) protein (59aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TF22_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75574.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5781..6041)
DNA (261bp) protein (87aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T8C3_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS49702.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_068_243G1_scaffold_183_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6373..7158)
DNA (786bp) protein (262aa)
Hydrolase of the HAD superfamily n=6 Tax=Lactobacillus rhamnosus RepID=C7TF20_LACRL
HAD superfamily hydrolase
Uncharacterized protein {ECO:0000313|EMBL:AGP75572.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7437..8147)
DNA (711bp) protein (237aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Glucosamine-6-phosphate deaminase n=10 Tax=Lactobacillus rhamnosus RepID=B5QN35_LACRH
nagB; glucosamine-6-phosphate deaminase
L3_068_243G1_scaffold_183_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8616..10433
DNA (1818bp) protein (606aa)
PTS system, mannitol-specific IIBC component n=3 Tax=Lactobacillus rhamnosus RepID=C7TF18_LACRL
mtlA; PTS system, mannitol-specific IIC component family protein
PTS system, mannitol-specific IIBC component {ECO:0000313|EMBL:AGP75570.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10445..12526
DNA (2082bp) protein (694aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=C7TF17_LACRL
Mannitol operon activator, BglG family
HTH domain protein {ECO:0000313|EMBL:EEN81415.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_183_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12531..12974
DNA (444bp) protein (148aa)
PTS system mannitol-specific IIA component {ECO:0000313|EMBL:EKS49697.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS49697.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Mannitol/fructose-specific phosphotransferase system, IIA domain n=12 Tax=Lactobacillus rhamnosus RepID=B5QN38_LACRH
mtlF; PTS system mannitol-specific transporter subunit IIA
L3_068_243G1_scaffold_183_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12978..14132
DNA (1155bp) protein (385aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Mannitol-1-phosphate 5-dehydrogenase n=7 Tax=Lactobacillus rhamnosus RepID=C7TF15_LACRL
mtlD; mannitol-1-phosphate 5-dehydrogenase
L3_068_243G1_scaffold_183_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14241..15194
DNA (954bp) protein (318aa)
Esterase B n=10 Tax=Lactobacillus rhamnosus RepID=B2CZF4_LACRH
esterase/lipase
Esterase B {ECO:0000313|EMBL:ACB47389.1}; TaxID=486408 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus HN001.;"
L3_068_243G1_scaffold_183_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15362..16291)
DNA (930bp) protein (310aa)
Hydrolase of the alpha/beta superfamily protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QN41_LACRH
ybcH; alpha/beta superfamily hydrolase
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:AGP75565.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16492..17412
DNA (921bp) protein (307aa)
Phosphoribosylpyrophosphate synthetase n=13 Tax=Lactobacillus rhamnosus RepID=B5QN42_LACRH
prs; ribose-phosphate pyrophosphokinase
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:AGP75564.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17925..18854
DNA (930bp) protein (310aa)
PEP phosphonomutase-like protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TNC3_LACRL
dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AGP75563.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19033..19713
DNA (681bp) protein (227aa)
Glutamine amidotransferase n=10 Tax=Lactobacillus rhamnosus RepID=C7TNC2_LACRL
glutamine amidotransferase class-I family protein
GMP synthase {ECO:0000313|EMBL:KIC97768.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_183_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19886..20284
DNA (399bp) protein (133aa)
Uncharacterized protein n=10 Tax=Lactobacillus rhamnosus RepID=S5A1A7_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81448.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_183_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20593..21447
DNA (855bp) protein (285aa)
3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TNC0_LACRL
NAD-dependent glycerol-3-phosphate dehydrogenase family protein
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KIC97766.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_068_243G1_scaffold_183_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21679..22071)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=U2I832_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC97765.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L3_068_243G1_scaffold_183_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22260..23237)
DNA (978bp) protein (326aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEN81452.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEN81452.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=4 Tax=Lactobacillus rhamnosus RepID=C7TNB9_LACRL
D-3-phosphoglycerate dehydrogenase
L3_068_243G1_scaffold_183_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23472..24002
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Lactobacillus rhamnosus RepID=UPI00037056A3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75558.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24186..24875)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TNB7_LACRL
response regulator
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24853..26406)
DNA (1554bp) protein (518aa)
Two-component sensor histidine kinase, malate n=2 Tax=Lactobacillus rhamnosus RepID=S5A5I1_LACRH
Two-component sensor histidine kinase, malate
PAS domain S-box protein {ECO:0000313|EMBL:EEN81455.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_183_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26554..27879
DNA (1326bp) protein (442aa)
Citrate carrier protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TNB5_LACRL
cimH; citrate/malate transporter
Malate Na(+) symporter {ECO:0000313|EMBL:AGP75555.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27916..29094
DNA (1179bp) protein (393aa)
NAD-dependent malic enzyme n=5 Tax=Lactobacillus rhamnosus RepID=C7TNB4_LACRL
mae; NAD-dependent malic enzyme
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEN81457.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_068_243G1_scaffold_183_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29315..29563
DNA (249bp) protein (83aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TNB3_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75553.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_068_243G1_scaffold_183_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29657..29947
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=C2JU66_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN81459.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_068_243G1_scaffold_183_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30362..31756
DNA (1395bp) protein (465aa)
Aspartate ammonia-lyase n=5 Tax=Lactobacillus rhamnosus RepID=C7TNB2_LACRL
lyase family protein
Aspartate ammonia-lyase {ECO:0000313|EMBL:AGP75551.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 43 in total

View Taxonomy