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L3_068_243G1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_226_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..870)
DNA (870bp) protein (290aa)
Sugar-binding domain protein n=3 Tax=Clostridiales RepID=G9YLI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34552.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L3_068_243G1_scaffold_226_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1056..2855
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72880.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_243G1_scaffold_226_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2845..5007
DNA (2163bp) protein (721aa)
Glycosyl hydrolase family 65 central catalytic domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D019_9CLOT
Glycosyl hydrolase family 65 central catalytic domain protein {ECO:0000313|EMBL:ERI72881.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
glycosyl hydrolase family 65 central catalytic domain-containing protein
L3_068_243G1_scaffold_226_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5065..5688)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34549.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_226_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5795..6034)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34548.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_226_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6368..7246
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56497.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_243G1_scaffold_226_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7250..7537
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI72886.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_243G1_scaffold_226_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7548..7730)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34546.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_226_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8489..9223)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34545.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Methyltransferase domain.
L3_068_243G1_scaffold_226_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9239..11164)
DNA (1926bp) protein (642aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B421_9CLOT
5'-nucleotidase protein {ECO:0000313|EMBL:ERI72889.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_243G1_scaffold_226_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11348..11980
DNA (633bp) protein (211aa)
Translation initiation factor IF-3 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS4_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
infC; translation initiation factor IF-3
L3_068_243G1_scaffold_226_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12023..12226
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=3 Tax=Clostridiales RepID=G9YMM8_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpmI; 50S ribosomal protein L35
L3_068_243G1_scaffold_226_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12268..12624
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Clostridiales RepID=G9YMM9_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rplT; 50S ribosomal protein L20
L3_068_243G1_scaffold_226_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13281..14291)
DNA (1011bp) protein (337aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Clostridiales RepID=G9YMN1_9FIRM
L3_068_243G1_scaffold_226_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14358..14936)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AXZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65005.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
N-acetyltransferase GCN5
L3_068_243G1_scaffold_226_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14929..15381)
DNA (453bp) protein (151aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.-)
Ribosomal-protein-alanine acetyltransferase n=3 Tax=Clostridiales RepID=G9YMN3_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KGF56487.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_243G1_scaffold_226_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15395..15634)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65003.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_243G1_scaffold_226_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15648..16232)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6T6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65002.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
GNAT family acetyltransferase
L3_068_243G1_scaffold_226_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16356..19004)
DNA (2649bp) protein (883aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAR5_9FIRM
L3_068_243G1_scaffold_226_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19221..19766)
DNA (546bp) protein (182aa)
Signal peptide protein, YSIRK family n=2 Tax=Clostridiales RepID=U2BWD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34425.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_226_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19759..20250)
DNA (492bp) protein (164aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=H1CAF5_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34424.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_068_243G1_scaffold_226_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20381..21688)
DNA (1308bp) protein (436aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUW0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM41522.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MATE efflux family protein
L3_068_243G1_scaffold_226_23
unknown

Not on your lists

21976..22521
DNA (546bp) protein (182aa)

This feature has no annotations

L3_068_243G1_scaffold_226_24
unknown

Not on your lists

22676..22816
DNA (141bp) protein (47aa)

This feature has no annotations

L3_068_243G1_scaffold_226_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22858..24267)
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Clostridiales RepID=H1CAF3_9FIRM
L3_068_243G1_scaffold_226_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24264..24995)
DNA (732bp) protein (244aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Clostridiales RepID=H1CAF2_9FIRM
L3_068_243G1_scaffold_226_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25281..25775
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2D3J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34420.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_243G1_scaffold_226_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26249..26728
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BW71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56476.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_243G1_scaffold_226_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26776..27405)
DNA (630bp) protein (210aa)
Transferase hexapeptide repeat family phosphonate metabolim protein n=2 Tax=Clostridiales RepID=H1CAE9_9FIRM
Transferase hexapeptide repeat family phosphonate metabolim protein {ECO:0000313|EMBL:EHO34418.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphonate metabolism protein
L3_068_243G1_scaffold_226_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27405..27932)
DNA (528bp) protein (176aa)
pgsA; phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Clostridiales RepID=H1CAE8_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EHO34417.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 40 in total

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