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L3_068_243G1_scaffold_644

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_644_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..641)
DNA (639bp) protein (213aa)
Protein RecA n=13 Tax=Bifidobacterium RepID=RECA_BIFLO
recombinase RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_243G1_scaffold_644_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(942..1175)
DNA (234bp) protein (78aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B7GQG7_BIFLS
Protein of unknown function (DUF3046).
Uncharacterized protein {ECO:0000313|EMBL:CBK70359.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_243G1_scaffold_644_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1287..1802)
DNA (516bp) protein (172aa)
Possible DNA binding protein n=15 Tax=Bifidobacterium RepID=Q8G4H0_BIFLO
Helix-turn-helix.
XRE family transcriptional regulator {ECO:0000313|EMBL:KEY31409.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_243G1_scaffold_644_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1862..2395)
DNA (534bp) protein (178aa)
Competence/damage-inducible protein cinA n=6 Tax=Bifidobacterium RepID=D6DCY6_BIFLN
competence-damage inducible protein
Competence/damage-inducible protein cinA {ECO:0000313|EMBL:CBK70357.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_243G1_scaffold_644_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2407..3042)
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=12 Tax=Bifidobacterium RepID=Q8G4H2_BIFLO
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:ACD97726.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_068_243G1_scaffold_644_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3219..6128)
DNA (2910bp) protein (970aa)
DNA translocase FtsK n=9 Tax=Bifidobacterium longum RepID=FTSK_BIFLO
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EIJ24950.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
cell division protein FtsK
L3_068_243G1_scaffold_644_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6340..7089
DNA (750bp) protein (250aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8CY48_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44795.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_243G1_scaffold_644_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7123..8109)
DNA (987bp) protein (329aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
tRNA dimethylallyltransferase n=13 Tax=Bifidobacterium RepID=MIAA_BIFLD
tRNA delta(2)-isopentenylpyrophosphate transferase
L3_068_243G1_scaffold_644_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8120..9574)
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=10 Tax=Bifidobacterium RepID=MIAB_BIFLD
miaB; miab
L3_068_243G1_scaffold_644_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9604..10446
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=Q8G4H5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25206.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_068_243G1_scaffold_644_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10479..11495)
DNA (1017bp) protein (339aa)
EamA-like transporter family n=14 Tax=Bifidobacterium RepID=D6DCY1_BIFLN
hypothetical protein
EamA-like transporter family protein {ECO:0000313|EMBL:BAP83763.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_068_243G1_scaffold_644_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11635..12534)
DNA (900bp) protein (300aa)
Integral Membrane protein n=13 Tax=Bifidobacterium longum RepID=E4R2D2_BIFLM
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY25547.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_243G1_scaffold_644_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12715..13560)
DNA (846bp) protein (282aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4H8_BIFLO
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43888.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_243G1_scaffold_644_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13895..14359
DNA (465bp) protein (155aa)
Atypical histidine kinase sensor of two-component system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4H9_BIFLO
two-component sensor kinase
Atypical histidine kinase sensor of two-component system protein {ECO:0000313|EMBL:CCY95380.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Displaying 14 items

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