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L3_068_243G1_scaffold_968

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_968_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..852)
DNA (852bp) protein (284aa)
Uncharacterized protein conserved in bacteria n=6 Tax=Bifidobacterium RepID=D6DAF5_BIFLN
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK71158.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_243G1_scaffold_968_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(895..1176)
DNA (282bp) protein (94aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DU37_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24245.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_068_243G1_scaffold_968_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1288..3996
DNA (2709bp) protein (903aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EEQ54476.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EEQ54476.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Copper-transporting ATPase n=3 Tax=Bifidobacterium longum RepID=E8MGJ1_BIFL2
copper-transporting ATPase
L3_068_243G1_scaffold_968_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4080..4814)
DNA (735bp) protein (245aa)
MIP family channel protein n=7 Tax=Bifidobacterium RepID=D6ZXT1_BIFLJ
MIP family channel protein
MIP family channel protein {ECO:0000313|EMBL:ADG99727.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_068_243G1_scaffold_968_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5048..6727)
DNA (1680bp) protein (560aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Phosphoenolpyruvate-protein phosphotransferase n=15 Tax=Bacteria RepID=B3DU40_BIFLD
PTS system enzyme I
L3_068_243G1_scaffold_968_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6727..6987)
DNA (261bp) protein (87aa)
PTS system HPr component n=18 Tax=Bifidobacterium RepID=B3DU41_BIFLD
PTS galactitol transporter subunit IIC
PTS galactitol transporter subunit IIC {ECO:0000313|EMBL:KEY23534.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_243G1_scaffold_968_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7374..7820)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=17 Tax=Bifidobacterium RepID=RL9_BIFLD
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_068_243G1_scaffold_968_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7840..8088)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=21 Tax=Bifidobacterium RepID=RS18_BIFLO
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_068_243G1_scaffold_968_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8149..8805)
DNA (657bp) protein (219aa)
Single-stranded DNA-binding protein n=5 Tax=Bifidobacterium longum RepID=D6ZXS6_BIFLJ
single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_243G1_scaffold_968_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8862..9152)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=26 Tax=Bifidobacterium RepID=RS6_BIFLO
rpsF; SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_068_243G1_scaffold_968_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9259..9741
DNA (483bp) protein (161aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C5E8Z2_BIFLI
Heme utilization protein {ECO:0000313|EMBL:KHD94595.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L3_068_243G1_scaffold_968_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9863..10798
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHD94596.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHD94596.1};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
PrsA2 n=3 Tax=Bifidobacterium longum RepID=E4R0K4_BIFLM
prsA2; prsa2
L3_068_243G1_scaffold_968_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10870..11703)
DNA (834bp) protein (278aa)
YggS like protein n=6 Tax=Bifidobacterium longum RepID=S3DMV3_BIFLN
hypothetical protein
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:AIW43239.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_243G1_scaffold_968_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11833..14253)
DNA (2421bp) protein (807aa)
Glycosyl hydrolase, family 43 n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3ATY9_BIFLN
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EIJ27064.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
glycosyl hydrolase family 43
L3_068_243G1_scaffold_968_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14216..15397)
DNA (1182bp) protein (394aa)
Putative xylanase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWG8_BIFLN
Putative xylanase {ECO:0000313|EMBL:ESV32826.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
xylanase
L3_068_243G1_scaffold_968_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15502..21333)
DNA (5832bp) protein (1944aa)
Bacterial Ig-like domain (Group 4)./Uncharacterised Sugar-binding Domain./F5/8 type C domain n=3 Tax=Bifidobacterium longum RepID=D6DAG8_BIFLN
hypothetical protein
Bacterial Ig-like domain (Group 4)./Uncharacterised Sugar-binding Domain./F5/8 type C domain {ECO:0000313|EMBL:CBK71171.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_243G1_scaffold_968_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22032..24671)
DNA (2640bp) protein (880aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bifidobacterium longum RepID=D6DAG9_BIFLN
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK71172.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
hypothetical protein
L3_068_243G1_scaffold_968_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24692..25315)
DNA (624bp) protein (208aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=8 Tax=Bifidobacterium RepID=D6DAH1_BIFLN
sugar permease of abc transporter system
Sugar ABC transporter permease {ECO:0000313|EMBL:AIW44474.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying 18 items

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