ggKbase home page

L3_068_243G1_scaffold_460

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_460_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1044)
DNA (1044bp) protein (348aa)
Mg chelatase-like protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EJB3_9CLOT
Mg chelatase-related protein {ECO:0000313|EMBL:EXG86503.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Mg chelatase subunit ChlI
L3_068_243G1_scaffold_460_2
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1257..1724)
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. CAG:127 RepID=R5P7H6_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
nrdR; transcriptional regulator NrdR
L3_068_243G1_scaffold_460_3
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1898..2173)
DNA (276bp) protein (92aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Clostridium sp. CAG:127 RepID=R5P9V1_9CLOT
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CCZ05772.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
sporulation protein, YlmC/YmxH family
L3_068_243G1_scaffold_460_4
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2363..3145)
DNA (783bp) protein (261aa)
Electron transport complex, rnfabcdge type, B subunit n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPT1_9FIRM
Electron transport complex, rnfabcdge type, B subunit {ECO:0000313|EMBL:EOS23823.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
ferredoxin
L3_068_243G1_scaffold_460_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3162..3737)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D4S1_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
RnfABCDGE type electron transport complex subunit A
L3_068_243G1_scaffold_460_6
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3755..4456)
DNA (702bp) protein (234aa)
Electron transport complex, RnfABCDGE type, E subunit n=3 Tax=Anaerostipes RepID=B0MDM8_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
electron transport complex, RnfABCDGE type, E subunit
L3_068_243G1_scaffold_460_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4456..5061)
DNA (606bp) protein (202aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5P8_9FIRM
electron transport complex, RnfABCDGE type, G subunit
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_068_243G1_scaffold_460_8
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5061..6011)
DNA (951bp) protein (317aa)
Electron transport complex protein RnfD n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JYQ8_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit
L3_068_243G1_scaffold_460_9
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6026..7351)
DNA (1326bp) protein (442aa)
Electron transport complex RnfABCDGE type C subunit n=1 Tax=Clostridium sp. CAG:590 RepID=R5EL98_9CLOT
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
electron transport complex, RnfABCDGE type, C subunit
L3_068_243G1_scaffold_460_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8029..8277)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4CAF3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE13228.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_068_243G1_scaffold_460_11
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..8574)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BVF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59560.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_068_243G1_scaffold_460_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8594..9517)
DNA (924bp) protein (308aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Blautia sp. CAG:257 RepID=R5WUZ4_9FIRM
Serine O-acetyltransferase {ECO:0000313|EMBL:CDA06400.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_068_243G1_scaffold_460_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9821..11980)
DNA (2160bp) protein (720aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNL8_9FIRM
L3_068_243G1_scaffold_460_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12223..12642)
DNA (420bp) protein (140aa)
Transcriptional regulators n=4 Tax=Clostridiales RepID=D4N103_9FIRM
Transcriptional regulators
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS20770.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_068_243G1_scaffold_460_15
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..13672)
DNA (834bp) protein (278aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JEC6_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS29497.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter permease
L3_068_243G1_scaffold_460_16
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13684..14589)
DNA (906bp) protein (302aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5W0_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS29498.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter permease
L3_068_243G1_scaffold_460_17
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14771..16123)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29499.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
extracellular solute-binding protein
L3_068_243G1_scaffold_460_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16730..17950)
DNA (1221bp) protein (407aa)
Metallo-beta-lactamase domain protein n=4 Tax=Clostridium RepID=E9SKK7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06165.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Uncharacterized flavoproteins
L3_068_243G1_scaffold_460_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17962..19875)
DNA (1914bp) protein (638aa)
acyl-CoA dehydrogenase/protein FixB (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KS72_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EPC05137.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Displaying 19 items

View Taxonomy