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L3_068_243G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_42_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

346..459
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M2V3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10060.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_068_243G1_scaffold_42_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(813..1220)
DNA (408bp) protein (136aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C3QNS1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM95811.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_068_243G1_scaffold_42_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1414..2628
DNA (1215bp) protein (405aa)
Predicted ATPase (AAA+ superfamily) n=9 Tax=Bacteroides RepID=D6D644_9BACE
Predicted ATPase (AAA+ superfamily)
Uncharacterized protein {ECO:0000313|EMBL:EDO10057.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_068_243G1_scaffold_42_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2709..2963)
DNA (255bp) protein (85aa)
50S ribosomal protein L31 type B n=15 Tax=Bacteroides RepID=D6D643_9BACE
LSU ribosomal protein L31P
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_068_243G1_scaffold_42_5
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3398..4402
DNA (1005bp) protein (335aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=2 Tax=Bacteroides RepID=C3QNR8_9BACE
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EFI41276.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_068_243G1_scaffold_42_6
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4587..5747)
DNA (1161bp) protein (387aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:EEZ01940.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EEZ01940.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Sodium ion-translocating decarboxylase, beta subunit n=13 Tax=Bacteroides RepID=D6D640_9BACE
L3_068_243G1_scaffold_42_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5749..6180)
DNA (432bp) protein (144aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit (EC:4.1.1.41)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=8 Tax=Bacteroides RepID=D6D639_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97250.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_068_243G1_scaffold_42_8
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6205..7125)
DNA (921bp) protein (307aa)
Oxaloacetate decarboxylase, gamma chain n=2 Tax=Bacteroides RepID=A7M2U4_BACOV
Oxaloacetate decarboxylase, gamma chain superfamily {ECO:0000313|EMBL:EFI12466.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Oxaloacetate decarboxylase, gamma chain.
L3_068_243G1_scaffold_42_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7157..8710)
DNA (1554bp) protein (518aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.41 6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=9 Tax=Bacteroides RepID=D6D637_9BACE
Carboxyl transferase domain protein {ECO:0000313|EMBL:EFF50847.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_068_243G1_scaffold_42_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8739..9143)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5 5.1.99.1)
Methylmalonyl-CoA epimerase n=21 Tax=Bacteroides RepID=D6D636_9BACE
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EIY19403.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_068_243G1_scaffold_42_11
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9319..10317)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D635_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69538.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_068_243G1_scaffold_42_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10557..13796
DNA (3240bp) protein (1080aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=A7M2U0_BACOV
Putative outer membrane protein {ECO:0000313|EMBL:EFI41269.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
collagen-binding protein
L3_068_243G1_scaffold_42_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13821..15845
DNA (2025bp) protein (675aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LA63_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM95799.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_068_243G1_scaffold_42_14
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15952..16494
DNA (543bp) protein (181aa)
Carbonate dehydratase {ECO:0000313|EMBL:EEZ01946.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EEZ01946.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Carbonic anhydrase (EC:4.2.1.1)
Carbonate dehydratase n=8 Tax=Bacteroides RepID=A7M2T8_BACOV
L3_068_243G1_scaffold_42_15
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16583..16807)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bacteroides xylanisolvens RepID=I9A9A8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY84335.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_068_243G1_scaffold_42_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16987..17523
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YCF7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY60800.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Nitroreductase
L3_068_243G1_scaffold_42_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17526..17861
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JJW8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50854.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_243G1_scaffold_42_18
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17869..18663
DNA (795bp) protein (265aa)
NADP oxidoreductase coenzyme F420-dependent n=9 Tax=Bacteroides RepID=A7M2T4_BACOV
NADP oxidoreductase coenzyme F420-dependent superfamily {ECO:0000313|EMBL:EFI41263.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_068_243G1_scaffold_42_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18644..19165
DNA (522bp) protein (174aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:EDO10040.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDO10040.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=9 Tax=Bacteroides RepID=A7M2T3_BACOV
L3_068_243G1_scaffold_42_20
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19206..19787
DNA (582bp) protein (194aa)
Maf-like protein maf n=2 Tax=Bacteroides RepID=D4WKQ9_BACOV
Maf-like protein BN541_03504 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
MAF protein
L3_068_243G1_scaffold_42_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19971..22178)
DNA (2208bp) protein (736aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WKR0_BACOV
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFF50858.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_243G1_scaffold_42_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22186..23370)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=A7M2T0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10037.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Predicted membrane protein
L3_068_243G1_scaffold_42_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23557..24600)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SX86_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY60793.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_068_243G1_scaffold_42_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24625..25602)
DNA (978bp) protein (326aa)
ABC transporter, periplasmic substrate-binding family protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WKR3_BACOV
ABC transporter, periplasmic substrate-binding family protein {ECO:0000313|EMBL:EFF50861.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_068_243G1_scaffold_42_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25709..26968)
DNA (1260bp) protein (420aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Phosphoglycerate kinase n=16 Tax=Bacteroides RepID=D6D623_9BACE
L3_068_243G1_scaffold_42_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27062..27739)
DNA (678bp) protein (226aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=9 Tax=Bacteroides RepID=A7M2S6_BACOV
L3_068_243G1_scaffold_42_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27736..28935)
DNA (1200bp) protein (400aa)
Transporter, major facilitator family protein n=7 Tax=Bacteroides RepID=A7M2S5_BACOV
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF50864.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Arabinose efflux permease
L3_068_243G1_scaffold_42_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(29084..30103)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=9 Tax=Bacteroides RepID=A7M2S3_BACOV
L3_068_243G1_scaffold_42_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30224..31240
DNA (1017bp) protein (339aa)
TonB family C-terminal domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WKR8_BACOV
TonB family C-terminal domain protein {ECO:0000313|EMBL:EFF50866.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Gram-negative bacterial tonB protein.
L3_068_243G1_scaffold_42_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32132..32998
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WKR9_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50867.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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