ggKbase home page

L3_068_243G1_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_138_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(414..1478)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6KD55_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54655.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_243G1_scaffold_138_2
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1483..1770)
DNA (288bp) protein (96aa)
DNA binding domain, excisionase family n=4 Tax=Bacteroides RepID=D4WA92_BACOV
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:CDB60141.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
DNA binding domain, excisionase family
L3_068_243G1_scaffold_138_3
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1902..2861)
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=R6JFQ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60140.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_068_243G1_scaffold_138_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2944..4137)
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bacteroides RepID=D4WA90_BACOV
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFF54652.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
site-specific recombinase
L3_068_243G1_scaffold_138_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4320..5213)
DNA (894bp) protein (298aa)
Transporter family protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA89_BACOV
Transporter family protein {ECO:0000313|EMBL:EFF54651.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Predicted Na+-dependent transporter
L3_068_243G1_scaffold_138_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5337..6614
DNA (1278bp) protein (426aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFU1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99598.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_068_243G1_scaffold_138_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6624..7517
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA87_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54649.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
L3_068_243G1_scaffold_138_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7869..9281
DNA (1413bp) protein (471aa)
Chromosomal replication initiator protein DnaA n=15 Tax=Bacteroides RepID=D6D8E4_9BACE
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_068_243G1_scaffold_138_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9393..10136)
DNA (744bp) protein (248aa)
Nitroreductase family protein n=2 Tax=Bacteroides ovatus RepID=D4WA85_BACOV
Nitroreductase family protein {ECO:0000313|EMBL:EFF54647.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
oxidoreductase
L3_068_243G1_scaffold_138_10
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10421..12964
DNA (2544bp) protein (848aa)
Ribonucleoside-diphosphate reductase n=13 Tax=Bacteroides RepID=A7LZC5_BACOV
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CDB60132.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
putative ribonucleoside reductase
L3_068_243G1_scaffold_138_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13096..15777
DNA (2682bp) protein (894aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=F7M0U0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN08908.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_068_243G1_scaffold_138_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16080..17132
DNA (1053bp) protein (351aa)
Putative membrane protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA82_BACOV
Putative membrane protein {ECO:0000313|EMBL:EFF54644.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fucose 4-O-acetylase and related acetyltransferases
L3_068_243G1_scaffold_138_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17116..17487
DNA (372bp) protein (124aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EFF54643.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EFF54643.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=2 Tax=Bacteroides RepID=C3QWL6_9BACE
L3_068_243G1_scaffold_138_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17619..18143)
DNA (525bp) protein (175aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=7 Tax=Bacteroides RepID=A7LZC1_BACOV
L3_068_243G1_scaffold_138_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18147..19175)
DNA (1029bp) protein (343aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFF54641.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFF54641.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA79_BACOV
Predicted glycosyltransferases
L3_068_243G1_scaffold_138_16
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19178..20101)
DNA (924bp) protein (308aa)
Lauroyl/myristoyl acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=5 Tax=Bacteroides RepID=C3QG74_9BACE
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase {ECO:0000313|EMBL:EEO50958.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_068_243G1_scaffold_138_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20104..21423)
DNA (1320bp) protein (440aa)
MiaB-like protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA77_BACOV
MiaB-like protein {ECO:0000313|EMBL:EFF54639.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
MiaB-like tRNA modifying enzyme
L3_068_243G1_scaffold_138_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21534..23207
DNA (1674bp) protein (558aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA76_BACOV
AMP-binding enzyme {ECO:0000313|EMBL:EFF54638.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_068_243G1_scaffold_138_19
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23367..23588
DNA (222bp) protein (74aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C3QG78_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO50962.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_068_243G1_scaffold_138_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23677..24558)
DNA (882bp) protein (294aa)
AP endonuclease, family 2 n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WA73_BACOV
AP endonuclease, family 2 {ECO:0000313|EMBL:EFF54635.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Xylose isomerase-like TIM barrel.
L3_068_243G1_scaffold_138_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24731..25597)
DNA (867bp) protein (289aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7LZB4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99583.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Domain of Unknown Function (DUF1080).
L3_068_243G1_scaffold_138_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25636..27123)
DNA (1488bp) protein (496aa)
Tat pathway signal sequence domain protein n=4 Tax=Bacteroides RepID=A7LZB3_BACOV
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDO11285.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Predicted dehydrogenases and related proteins
L3_068_243G1_scaffold_138_23
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27136..28248)
DNA (1113bp) protein (371aa)
Oxidoreductase, NAD-binding domain protein n=5 Tax=Bacteroides RepID=C3QG82_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEZ04673.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Predicted dehydrogenases and related proteins
L3_068_243G1_scaffold_138_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28488..30152)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LZB1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11283.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_068_243G1_scaffold_138_25
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30235..30678)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=9 Tax=Bacteroides RepID=C3QG84_9BACE
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_068_243G1_scaffold_138_26
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30693..30965)
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=9 Tax=Bacteroides RepID=A5ZJE6_9BACE
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
30S ribosomal protein S18
L3_068_243G1_scaffold_138_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30968..31312)
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=13 Tax=Bacteroides RepID=D6D8C7_9BACE
SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_068_243G1_scaffold_138_28
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31473..31919
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=16 Tax=Bacteroides RepID=D6D8C6_9BACE
transcriptional regulator, MarR family
MarR family transcriptional regulator {ECO:0000313|EMBL:EFI11770.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_068_243G1_scaffold_138_29
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32060..32236
DNA (177bp) protein (59aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A7LZA6_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM05633.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_068_243G1_scaffold_138_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32314..33015)
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides ovatus RepID=D4WA63_BACOV
Transcriptional regulatory protein rprY {ECO:0000313|EMBL:EGM99574.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 1-30 of 51 in total

View Taxonomy