ggKbase home page

L3_068_243G1_scaffold_241

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_243G1_scaffold_241_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..738
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNM9_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF49841.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
lipoprotein
L3_068_243G1_scaffold_241_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

808..1710
DNA (903bp) protein (301aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNM8_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF49840.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_243G1_scaffold_241_3
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1807..2127
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K162_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40461.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_068_243G1_scaffold_241_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2256..3380
DNA (1125bp) protein (375aa)
Putative lipoprotein n=2 Tax=Bacteroides RepID=D4WNM7_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40460.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_068_243G1_scaffold_241_5
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3477..5489
DNA (2013bp) protein (671aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K160_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40459.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_068_243G1_scaffold_241_6
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5480..7360
DNA (1881bp) protein (627aa)
Putative lipoprotein n=2 Tax=Bacteroides RepID=D4WNM5_BACOV
Putative glutaminase {ECO:0000313|EMBL:EFI40458.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
putative exported glutaminase
L3_068_243G1_scaffold_241_7
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7357..8232
DNA (876bp) protein (292aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Signal peptidase I n=2 Tax=Bacteroides RepID=D4WNM4_BACOV
putative signal peptidase I
L3_068_243G1_scaffold_241_8
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8274..8558
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K157_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40456.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_068_243G1_scaffold_241_9
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8590..9723
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D7K156_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40455.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_068_243G1_scaffold_241_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9775..11388
DNA (1614bp) protein (538aa)
O-antigen polymerase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNM2_BACOV
O-antigen polymerase {ECO:0000313|EMBL:EFF49834.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_243G1_scaffold_241_11
unknown

Not on your lists

11408..11509
DNA (102bp) protein (34aa)

This feature has no annotations

L3_068_243G1_scaffold_241_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11529..12677
DNA (1149bp) protein (383aa)
Putative lipoprotein n=2 Tax=Bacteroides RepID=D4WNM1_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40453.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
putative lipoprotein
L3_068_243G1_scaffold_241_13
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12712..13806
DNA (1095bp) protein (365aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroides RepID=D4WNM0_BACOV
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDB56877.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
cation efflux system protein
L3_068_243G1_scaffold_241_14
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13855..16941
DNA (3087bp) protein (1029aa)
RND transporter, HAE1/HME family, permease protein n=4 Tax=Bacteroides RepID=C3R2H1_9BACE
Putative cation efflux system {ECO:0000313|EMBL:CDB56876.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
cation efflux system
L3_068_243G1_scaffold_241_15
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16958..18466
DNA (1509bp) protein (503aa)
Outer membrane efflux protein n=3 Tax=Bacteroides RepID=C3R2H0_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:CDB56875.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
outer membrane protein TolC
L3_068_243G1_scaffold_241_16
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18472..21717
DNA (3246bp) protein (1082aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3R2G9_9BACE
Drug efflux protein {ECO:0000313|EMBL:CDB56874.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
drug efflux protein
L3_068_243G1_scaffold_241_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21767..22324)
DNA (558bp) protein (186aa)
Flavodoxin-like protein n=4 Tax=Bacteroides RepID=C3R2G8_9BACE
Flavodoxin-like protein {ECO:0000313|EMBL:EFF49828.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Putative NADPH-quinone reductase (modulator of drug activity B)
L3_068_243G1_scaffold_241_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22502..23641
DNA (1140bp) protein (380aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=4 Tax=Bacteroides RepID=A7LX16_BACOV
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:KDS19345.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
L3_068_243G1_scaffold_241_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23538..23786)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8YP88_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68576.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_068_243G1_scaffold_241_20
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24565..25731
DNA (1167bp) protein (389aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=5 Tax=Bacteroides RepID=A7LX17_BACOV
L3_068_243G1_scaffold_241_21
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25753..26928
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=4 Tax=Bacteroides RepID=C3R2G5_9BACE
L3_068_243G1_scaffold_241_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27170..27532)
DNA (363bp) protein (121aa)
Thioredoxin n=3 Tax=Bacteroides RepID=C3R2G4_9BACE
Putative thioredoxin {ECO:0000313|EMBL:EFF52395.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Thioredoxin domain-containing protein
L3_068_243G1_scaffold_241_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27769..29034
DNA (1266bp) protein (422aa)
Outer membrane efflux protein n=7 Tax=Bacteroides RepID=A7LX20_BACOV
Outer membrane efflux protein {ECO:0000313|EMBL:EFF52394.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Outer membrane protein
L3_068_243G1_scaffold_241_24
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29057..30151
DNA (1095bp) protein (365aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=D4WGE2_BACOV
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDB56864.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
cation efflux system protein CzcB
L3_068_243G1_scaffold_241_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30166..33291
DNA (3126bp) protein (1042aa)
Heavy metal efflux pump, CzcA family n=2 Tax=Bacteroides RepID=D4WGE1_BACOV
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EFS33581.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
heavy metal efflux pump (cobalt-zinc-cadmium)
L3_068_243G1_scaffold_241_26
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33379..34710)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R2G0_9BACE
Signal transduction histidine kinase
L3_068_243G1_scaffold_241_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34734..35408)
DNA (675bp) protein (225aa)
Transcriptional regulatory protein CusR n=5 Tax=Bacteroides RepID=C3R2F9_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EFF52390.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
two component transcriptional regulator, winged helix family
L3_068_243G1_scaffold_241_28
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35512..35595)
DNA (84bp) protein (28aa)
Transposase (IS4 family) n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7KAH2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38027.1}; Flags: Fragment;; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
H repeat-containing protein
Displaying 28 items

View Taxonomy