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L3_068_368G1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_25_1
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1018)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3W2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72787.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_068_368G1_scaffold_25_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(997..1359)
DNA (363bp) protein (121aa)
Ribbon-helix-helix protein, copG family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT60_9FIRM
Ribbon-helix-helix protein, copG family.
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:CBL10062.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_25_3
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1395..1841)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AVU3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56334.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L3_068_368G1_scaffold_25_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1875..2249)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C4Z3W6_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09968.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_25_5
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2242..2583)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C4Z3W7_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72792.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_068_368G1_scaffold_25_6
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2663..3859)
DNA (1197bp) protein (399aa)
Integrase/recombinase XerC n=2 Tax=Clostridiales RepID=C4Z3W8_EUBE2
Site-specific recombinase XerD
Integrase/recombinase XerC {ECO:0000313|EMBL:ACR72793.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_068_368G1_scaffold_25_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3951..4136)
DNA (186bp) protein (62aa)
Prophage CP4-57 regulatory protein (AlpA) n=2 Tax=Clostridiales RepID=D4KSW3_9FIRM
Prophage CP4-57 regulatory protein (AlpA).
Prophage CP4-57 regulatory protein (AlpA) {ECO:0000313|EMBL:CBL09965.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_25_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4532..5080
DNA (549bp) protein (183aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSW2_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL09964.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_25_9
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5416..6573
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33775.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_068_368G1_scaffold_25_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6579..7115
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14115.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_068_368G1_scaffold_25_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7247..7996)
DNA (750bp) protein (250aa)
bacitracin ABC transporter permease n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028948D4
Bacitracin transport permease protein BCRB {ECO:0000313|EMBL:EEU89505.1}; TaxID=565651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ARO1/DG.;"
bacitracin ABC ATP binding cassette transporter, membrane protein
L3_068_368G1_scaffold_25_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7989..8915)
DNA (927bp) protein (309aa)
Bacitracin transport ATP-binding protein BcrA n=1 Tax=Clostridium ultunense Esp RepID=M1YWT1_9CLOT
Bacitracin transport ATP-binding protein BcrA {ECO:0000313|EMBL:CCQ95050.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
L3_068_368G1_scaffold_25_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8939..10675)
DNA (1737bp) protein (579aa)
Putative multidrug export ATP-binding/permease protein n=2 Tax=Clostridium botulinum A RepID=A7FR70_CLOB1
multidrug export ATP-binding protein/permease
Putative multidrug export ATP-binding/permease protein {ECO:0000313|EMBL:ACO84752.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_068_368G1_scaffold_25_14
unknown

Not on your lists

comp(10805..10996)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_068_368G1_scaffold_25_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11037..11321)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T092_CLOSG
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23981.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
L3_068_368G1_scaffold_25_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11339..13510)
DNA (2172bp) protein (724aa)
Radical SAM domain protein n=3 Tax=Clostridium botulinum RepID=A7FR66_CLOB1
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACO87072.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_068_368G1_scaffold_25_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13860..14255
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14116.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_068_368G1_scaffold_25_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..14985
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14117.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_068_368G1_scaffold_25_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15001..15894
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47618.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_368G1_scaffold_25_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15895..17109
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47620.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_068_368G1_scaffold_25_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17208..20201
DNA (2994bp) protein (998aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14120.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_068_368G1_scaffold_25_22
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20329..20868
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET59088.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_068_368G1_scaffold_25_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20868..21530
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6R930_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC44370.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_368G1_scaffold_25_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21707..22822
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SCN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC44372.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_068_368G1_scaffold_25_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22873..24783
DNA (1911bp) protein (637aa)
TraG/TraD family protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6G8_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EDR46729.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Type IV secretory pathway, VirD4 components
L3_068_368G1_scaffold_25_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24808..25899
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14126.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_068_368G1_scaffold_25_27
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25934..26782)
DNA (849bp) protein (283aa)
HNH endonuclease n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K6W6_9FIRM
HNH endonuclease {ECO:0000313|EMBL:CDB66844.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
ea31: protein ea31
L3_068_368G1_scaffold_25_28
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26775..28331)
DNA (1557bp) protein (519aa)
HYPOTHETICAL CONSERVED PROTEIN n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JVN4_9FIRM
HYPOTHETICAL CONSERVED PROTEIN {ECO:0000313|EMBL:CDB66843.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
phage related protein
L3_068_368G1_scaffold_25_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28633..29058
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14131.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_068_368G1_scaffold_25_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29067..29549
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14132.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Displaying items 1-30 of 139 in total

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