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L3_068_368G1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_32_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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188..1642
DNA (1455bp) protein (485aa)
arginine decarboxylase (EC:4.1.1.18 4.1.1.19)
Arginine decarboxylase n=3 Tax=Roseburia RepID=D4KNP6_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EEV01172.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_32_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1710..2573
DNA (864bp) protein (288aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=4 Tax=Roseburia RepID=D4KNP7_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2672..3931
DNA (1260bp) protein (420aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Carboxynorspermidine dehydrogenase {ECO:0000313|EMBL:CBL11311.1}; EC=1.5.1.7 {ECO:0000313|EMBL:CBL11311.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Carboxynorspermidine dehydrogenase n=3 Tax=Roseburia intestinalis RepID=D4KNP8_9FIRM
L3_068_368G1_scaffold_32_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4019..5152
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=3 Tax=Roseburia RepID=D4KNP9_9FIRM
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EEV01175.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_32_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5124..6347
DNA (1224bp) protein (408aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAJ9_9FIRM
L3_068_368G1_scaffold_32_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6425..7315
DNA (891bp) protein (297aa)
N-carbamoylputrescine amidase (EC:3.5.1.53)
N-carbamoylputrescine amidase {ECO:0000313|EMBL:CBL11313.1}; EC=3.5.1.53 {ECO:0000313|EMBL:CBL11313.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
N-carbamoylputrescine amidase n=2 Tax=Roseburia intestinalis RepID=D4KNQ1_9FIRM
L3_068_368G1_scaffold_32_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7551..8561)
DNA (1011bp) protein (337aa)
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Aspartate--ammonia ligase n=4 Tax=Roseburia RepID=D4KNQ2_9FIRM
L3_068_368G1_scaffold_32_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8829..10811
DNA (1983bp) protein (661aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAK4_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EEV01181.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyl-accepting chemotaxis protein
L3_068_368G1_scaffold_32_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10827..11801
DNA (975bp) protein (325aa)
Sugar-binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAK5_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EEV01182.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type sugar transport system, periplasmic component
L3_068_368G1_scaffold_32_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11816..12364
DNA (549bp) protein (183aa)
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVC7_9FIRM
G:T/U mismatch-specific DNA glycosylase
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CBL11317.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_32_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12336..12761
DNA (426bp) protein (142aa)
Transglycosylase-associated protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1J6_9FIRM
Transglycosylase-associated protein {ECO:0000313|EMBL:CDA54869.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_32_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12857..13060)
DNA (204bp) protein (68aa)
DNA-binding helix-turn-helix protein n=2 Tax=Roseburia RepID=C7GAK8_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDA54870.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Helix-turn-helix.
L3_068_368G1_scaffold_32_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13178..18742
DNA (5565bp) protein (1855aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVC9_9FIRM
Listeria/Bacterioides repeat
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBL11319.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_32_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19254..19934
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNQ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08509.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19931..20227
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNQ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08509.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20425..21141
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=2 Tax=Roseburia intestinalis RepID=C7GAL2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01189.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_068_368G1_scaffold_32_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21204..24005
DNA (2802bp) protein (934aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPN1_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBL08833.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24809..25033
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPN2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEV01298.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_32_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25111..26388
DNA (1278bp) protein (426aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVD7_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBL11327.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_32_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26475..27365
DNA (891bp) protein (297aa)
rRNA methylases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVD8_9FIRM
rRNA methylases
rRNA methylases {ECO:0000313|EMBL:CBL11328.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_32_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27474..28631
DNA (1158bp) protein (386aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B892_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDA57129.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_32_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28964..30994
DNA (2031bp) protein (677aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVE1_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBL11331.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_368G1_scaffold_32_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30972..31916
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BV62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57127.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_368G1_scaffold_32_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31913..33514)
DNA (1602bp) protein (534aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BDF9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDA57126.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
diguanylate cyclase (GGDEF) domain
L3_068_368G1_scaffold_32_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33755..34909
DNA (1155bp) protein (385aa)
Fucose permease n=4 Tax=Roseburia RepID=D4KPP3_9FIRM
Fucose permease
Fucose permease {ECO:0000313|EMBL:CBL08845.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34928..36349
DNA (1422bp) protein (474aa)
Transporter n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA55_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Na+-dependent transporters of the SNF family
L3_068_368G1_scaffold_32_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36366..38354
DNA (1989bp) protein (663aa)
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BV58_9FIRM
ATP-dependent DNA helicase RecQ family {ECO:0000313|EMBL:CDA57122.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_368G1_scaffold_32_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38314..39678)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA57_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EEV01309.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_368G1_scaffold_32_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39816..40685
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPP6_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL08848.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_368G1_scaffold_32_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40687..40953
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GA59_9FIRM
Putative platelet activating factor {ECO:0000313|EMBL:CDA57118.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
Displaying items 1-30 of 102 in total

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