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L3_068_368G1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_120_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..450)
DNA (450bp) protein (150aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XIM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13722.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_368G1_scaffold_120_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

637..2289
DNA (1653bp) protein (551aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VZ09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65780.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_368G1_scaffold_120_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2584..4251)
DNA (1668bp) protein (556aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=7 Tax=Clostridium clostridioforme RepID=G5HYR8_9CLOT
L3_068_368G1_scaffold_120_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4744..6096)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=6 Tax=Clostridium clostridioforme RepID=N9WRJ6_9CLOT
L3_068_368G1_scaffold_120_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6198..7145)
DNA (948bp) protein (316aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=9 Tax=Clostridium RepID=G5HYR6_9CLOT
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ENZ65777.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_120_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7174..8196)
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
dTDP-glucose 4,6-dehydratase n=10 Tax=Clostridium RepID=G5HYR5_9CLOT
dTDP-glucose 4,6-dehydratase
L3_068_368G1_scaffold_120_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8212..9111)
DNA (900bp) protein (300aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=10 Tax=Clostridium RepID=G5HYR4_9CLOT
L3_068_368G1_scaffold_120_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9263..9625)
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VYK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65774.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
leucine-rich repeat-containing protein
L3_068_368G1_scaffold_120_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9622..9978)
DNA (357bp) protein (119aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WRK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65773.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_120_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10438..11142)
DNA (705bp) protein (235aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=9 Tax=Clostridium RepID=G5HYR1_9CLOT
L3_068_368G1_scaffold_120_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11170..11634)
DNA (465bp) protein (155aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XIN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13712.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_368G1_scaffold_120_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11636..12559)
DNA (924bp) protein (308aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase n=9 Tax=Clostridium RepID=N9VZ16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24386.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_068_368G1_scaffold_120_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12562..13677)
DNA (1116bp) protein (372aa)
Oxidoreductase n=9 Tax=Clostridium RepID=N9VYK4_9CLOT
Oxidoreductase {ECO:0000313|EMBL:ENZ13710.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
putative oxidoreductase
L3_068_368G1_scaffold_120_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13707..14828)
DNA (1122bp) protein (374aa)
Oxidoreductase n=7 Tax=Clostridium RepID=N9WRK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24388.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
putative oxidoreductase
L3_068_368G1_scaffold_120_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14864..15694)
DNA (831bp) protein (277aa)
Multiple sugar ABC transporter permease n=10 Tax=Clostridium RepID=N9WR39_9CLOT
Multiple sugar ABC transporter permease {ECO:0000313|EMBL:ENZ13708.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glycerol-3-phosphate transporter membrane protein
L3_068_368G1_scaffold_120_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15691..16572)
DNA (882bp) protein (294aa)
Multiple sugar ABC transporter permease n=9 Tax=Clostridium RepID=N9XIN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24390.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_368G1_scaffold_120_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16647..18047)
DNA (1401bp) protein (467aa)
Multiple sugar ABC transporter substrate-binding protein n=7 Tax=Clostridium RepID=N9VZ20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24391.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_368G1_scaffold_120_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18331..18966)
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9VYK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24392.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_068_368G1_scaffold_120_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18942..19499)
DNA (558bp) protein (186aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WRL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13702.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_068_368G1_scaffold_120_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19634..20512)
DNA (879bp) protein (293aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WR44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65762.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Fe3+-hydroxamate ABC transporter substrate-binding protein
L3_068_368G1_scaffold_120_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20691..21674)
DNA (984bp) protein (328aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XER9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65761.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_068_368G1_scaffold_120_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21671..22150)
DNA (480bp) protein (160aa)
Sigma-70 family RNA polymerase sigma factor n=7 Tax=Clostridium RepID=N9VZ25_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ65760.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RNA polymerase ECF subfamily sigma factor
L3_068_368G1_scaffold_120_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22434..22751)
DNA (318bp) protein (106aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VYL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65759.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_120_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22748..23080)
DNA (333bp) protein (111aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WRM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65758.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_120_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23409..24482)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=9 Tax=Clostridium RepID=G5HYP6_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
peptide chain release factor 1
L3_068_368G1_scaffold_120_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24613..25476)
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=8 Tax=Clostridium clostridioforme RepID=G5HYP5_9CLOT
L3_068_368G1_scaffold_120_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25430..26554)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9VZ27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65755.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted metal-dependent enzyme
L3_068_368G1_scaffold_120_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27064..27651)
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WRM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65753.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_068_368G1_scaffold_120_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27690..28766)
DNA (1077bp) protein (359aa)
Metallopeptidase n=8 Tax=Clostridium clostridioforme RepID=N9WR54_9CLOT
Metallopeptidase {ECO:0000313|EMBL:ENZ13691.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Xaa-Pro aminopeptidase
L3_068_368G1_scaffold_120_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28784..29620)
DNA (837bp) protein (279aa)
Peptide/nickel ABC transporter permease n=8 Tax=Clostridium clostridioforme RepID=N9XER2_9CLOT
Peptide/nickel ABC transporter permease {ECO:0000313|EMBL:ENZ13690.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Displaying items 1-30 of 74 in total

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