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L3_068_368G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_142_1
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1403
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Enterobacter cloacae RepID=UPI0002D68D1F
L3_068_368G1_scaffold_142_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1459..2250)
DNA (792bp) protein (264aa)
Putative exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THC8_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL50783.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_142_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2263..3912)
DNA (1650bp) protein (550aa)
Membrane protein n=1 Tax=Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 RepID=S5GXB0_SALET
Membrane protein {ECO:0000313|EMBL:AKE57748.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
membrane protein
L3_068_368G1_scaffold_142_4
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4312..6909
DNA (2598bp) protein (866aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase n=1 Tax=Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 RepID=V1HWI6_SALET
L3_068_368G1_scaffold_142_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7084..7446
DNA (363bp) protein (121aa)
UPF0231 protein ROD_01261 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THD1_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE57750.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_368G1_scaffold_142_6
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7626..8579
DNA (954bp) protein (318aa)
2-keto-3-deoxygluconate permease n=2 Tax=Klebsiella oxytoca RepID=G8WLZ8_KLEOK
2-keto-3-deoxygluconate permease {ECO:0000256|HAMAP-Rule:MF_00070}; Short=KDG permease {ECO:0000256|HAMAP-Rule:MF_00070};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
2-keto-3-deoxygluconate permease
L3_068_368G1_scaffold_142_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8576..9847
DNA (1272bp) protein (424aa)
Putative uncharacterized protein ygbK n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V4A3_ESCHE
Uncharacterized protein {ECO:0000313|EMBL:GAL50777.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_142_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9837..10820
DNA (984bp) protein (328aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V4A4_ESCHE
4-hydroxythreonine-4-phosphate dehydrogenase
L3_068_368G1_scaffold_142_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10830..11618
DNA (789bp) protein (263aa)
Putative DeoR family transcriptional regulator YgbI n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V4A5_ESCHE
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AKE57754.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
DeoR faimly transcriptional regulator
L3_068_368G1_scaffold_142_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11635..11880
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M7P6_ENTBF
Uncharacterized protein {ECO:0000313|EMBL:AKE57755.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_368G1_scaffold_142_11
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12042..12491
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M619_ENTBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB78747.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L3_068_368G1_scaffold_142_12
unknown

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12488..12916
DNA (429bp) protein (143aa)

This feature has no annotations

L3_068_368G1_scaffold_142_13
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13357..14151)
DNA (795bp) protein (265aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=SPED_CITK8
S-adenosylmethionine decarboxylase
L3_068_368G1_scaffold_142_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14167..15033)
DNA (867bp) protein (289aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THD7_CITRI
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L3_068_368G1_scaffold_142_15
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15138..15524)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W6M7_ENT38
Uncharacterized protein {ECO:0000313|EMBL:KDF12796.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_068_368G1_scaffold_142_16
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15651..17210
DNA (1560bp) protein (520aa)
Blue copper oxidase (Copper efflux oxidase) n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THD9_CITRI
Blue copper oxidase CueO {ECO:0000313|EMBL:GAL50770.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
cueO; blue copper oxidase precursor (copper efflux oxidase)
L3_068_368G1_scaffold_142_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17374..17895
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=V3LVW8_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:GAL50769.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_142_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18169..19473
DNA (1305bp) protein (435aa)
PREDICTED: probable polygalacturonase-like n=1 Tax=Ceratitis capitata RepID=UPI000329A4A2
Putative glycosidase {ECO:0000313|EMBL:GAL50768.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glycoside hydrolase family 28
L3_068_368G1_scaffold_142_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19528..21918)
DNA (2391bp) protein (797aa)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BFC2_9ENTR
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:GAL50767.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
gcd; glucose dehydrogenase
L3_068_368G1_scaffold_142_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22057..23739)
DNA (1683bp) protein (561aa)
Hemolysin activator protein n=1 Tax=Cronobacter condimenti 1330 RepID=K8A1H4_9ENTR
Putative hemagglutinin transport protein {ECO:0000313|EMBL:GAL50766.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_142_21
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23905..26361)
DNA (2457bp) protein (819aa)
Hemolysin n=1 Tax=Cronobacter dublinensis 1210 RepID=K8AV57_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF04658.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_068_368G1_scaffold_142_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26930..27598
DNA (669bp) protein (223aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=5 Tax=Escherichia coli RepID=E9UAG5_ECOLX
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:GAL50763.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L3_068_368G1_scaffold_142_23
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27665..28327)
DNA (663bp) protein (221aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Carbonic anhydrase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YZL0_9ENTR
carbonic anhydrase
L3_068_368G1_scaffold_142_24
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28436..29362
DNA (927bp) protein (309aa)
ABC transporter, ATP-binding protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BFC5_9ENTR
Putative ABC transporter ATP-binding protein YadG {ECO:0000313|EMBL:GAL50761.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_142_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29359..30129
DNA (771bp) protein (257aa)
ABC transporter, permease protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THE5_CITRI
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ABC transporter permease
L3_068_368G1_scaffold_142_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30236..30676
DNA (441bp) protein (147aa)
PTS system fructose IIA component family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HAP6_SHIFL
Putative phosphotransferase system enzyme IIA component YadI {ECO:0000313|EMBL:GAL50759.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
phosphotransferase enzyme IIA component yadI
L3_068_368G1_scaffold_142_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30741..31967
DNA (1227bp) protein (409aa)
Putative polysaccharide deacetylase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THE7_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL50758.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
polysaccharide deacetylase
L3_068_368G1_scaffold_142_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31973..32353)
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=PAND_CITK8
Aspartate decarboxylase {ECO:0000313|EMBL:AKE57773.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
aspartate alpha-decarboxylase
L3_068_368G1_scaffold_142_29
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32504..33358)
DNA (855bp) protein (285aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THE9_CITRI
L3_068_368G1_scaffold_142_30
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33370..34161)
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Salmonella infantis RepID=V8M784_SALIN
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
Displaying items 1-30 of 56 in total

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