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L3_068_368G1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_156_1
unknown

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98..343
DNA (246bp) protein (82aa)

This feature has no annotations

L3_068_368G1_scaffold_156_2
unknown

Not on your lists

1172..1438
DNA (267bp) protein (89aa)

This feature has no annotations

L3_068_368G1_scaffold_156_3
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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1635..3689
DNA (2055bp) protein (685aa)
UvrABC system protein B n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AVB9_9PROT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
uvrB; UvrABC system protein B
L3_068_368G1_scaffold_156_4
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3797..4330
DNA (534bp) protein (178aa)
ptpA; low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase n=4 Tax=Proteobacteria RepID=F3QKV0_9BURK
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:EGG54060.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
L3_068_368G1_scaffold_156_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4445..4900
DNA (456bp) protein (152aa)
HTH-type transcriptional regulator IscR n=2 Tax=Parasutterella RepID=F3QKU9_9BURK
HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:CCX86156.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
iscR; DNA-binding transcriptional repressor
L3_068_368G1_scaffold_156_6
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4936..6144
DNA (1209bp) protein (403aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
nifS; NifS (EC:2.8.1.7)
Cysteine desulfurase n=2 Tax=Parasutterella RepID=F3QKU8_9BURK
L3_068_368G1_scaffold_156_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6160..6555
DNA (396bp) protein (132aa)
FeS cluster assembly scaffold IscU n=4 Tax=Proteobacteria RepID=D9Y687_9BURK
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:EFL82547.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
FeS cluster assembly scaffold IscU
L3_068_368G1_scaffold_156_8
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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6555..6878
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=4 Tax=Proteobacteria RepID=D9Y688_9BURK
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:CDA45037.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
iscA; [Fe-S] cluster formation/repair protein
L3_068_368G1_scaffold_156_9
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

6895..7395
DNA (501bp) protein (167aa)
Co-chaperone protein HscB homolog n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1Z1_9PROT
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hscB; co-chaperone HscB
L3_068_368G1_scaffold_156_10
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7395..9254
DNA (1860bp) protein (620aa)
Chaperone protein HscA homolog n=2 Tax=Parasutterella RepID=F3QKU4_9BURK
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
molecular chaperone HscA
L3_068_368G1_scaffold_156_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9258..9596
DNA (339bp) protein (113aa)
Ferredoxin, 2Fe-2S type, ISC system n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y691_9BURK
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:EFL82551.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
2Fe-2S ferredoxin
L3_068_368G1_scaffold_156_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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9593..9796
DNA (204bp) protein (68aa)
FeS assembly protein IscX n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AEQ9_9PROT
FeS assembly protein IscX {ECO:0000313|EMBL:CDA45026.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_156_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(9800..10639)
DNA (840bp) protein (280aa)
Hydrolase NUDIX family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A847_9PROT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDA45024.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
NUDIX domain protein
L3_068_368G1_scaffold_156_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(10645..12168)
DNA (1524bp) protein (508aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Lysine--tRNA ligase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AVA4_9PROT
lysU; lysyl-tRNA synthetase
L3_068_368G1_scaffold_156_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(12170..12937)
DNA (768bp) protein (256aa)
Oxidoreductase short-chain dehydrogenase/reductase family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1Y0_9PROT
Oxidoreductase short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:CDA45020.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
short-chain dehydrogenase/reductase sdr
L3_068_368G1_scaffold_156_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(12940..13782)
DNA (843bp) protein (281aa)
Peptide chain release factor 2 n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZZR6_9PROT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
prfB; peptide chain release factor 2
L3_068_368G1_scaffold_156_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(14177..15895)
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AEP9_9PROT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDA45011.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
single-stranded-DNA-specific exonuclease RecJ
L3_068_368G1_scaffold_156_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(15909..16952)
DNA (1044bp) protein (348aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1W7_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA45010.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_156_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

17019..18293
DNA (1275bp) protein (425aa)
Lipoprotein releasing system transmembrane protein LolC/E family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A830_9PROT
Lipoprotein releasing system transmembrane protein LolC/E family {ECO:0000313|EMBL:CDA45009.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
lipoprotein releasing system transmembrane
L3_068_368G1_scaffold_156_20
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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18286..18975
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Lipoprotein releasing system ATP-binding protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZZR1_9PROT
lipoprotein releasing system, ATP-binding protein
L3_068_368G1_scaffold_156_21
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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18976..19815
DNA (840bp) protein (280aa)
Hydrolase TatD family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1W6_9PROT
Hydrolase TatD family {ECO:0000313|EMBL:CDA45005.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
TatD-like deoxyribonuclease
L3_068_368G1_scaffold_156_22
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19957..20538
DNA (582bp) protein (194aa)
ACT domain protein n=2 Tax=Proteobacteria RepID=R5E661_9BURK
ACT domain protein {ECO:0000313|EMBL:CCX87973.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
amino acid-binding ACT domain-containing protein
L3_068_368G1_scaffold_156_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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20559..21932
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AV91_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA45002.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_156_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

21948..22304
DNA (357bp) protein (119aa)
Endoribonuclease L-PSP n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AEN9_9PROT
Endoribonuclease L-PSP {ECO:0000313|EMBL:CDA45001.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_068_368G1_scaffold_156_25
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

22393..24522
DNA (2130bp) protein (710aa)
RelA/SpoT family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1V3_9PROT
RelA/SpoT family protein {ECO:0000313|EMBL:CDA45000.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
GTP diphosphokinase
L3_068_368G1_scaffold_156_26
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24846..25811)
DNA (966bp) protein (322aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A811_9PROT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CDA44999.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
band 7 protein
L3_068_368G1_scaffold_156_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(25813..26244)
DNA (432bp) protein (144aa)
Putative NfeD family protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZZP9_9PROT
Putative NfeD family protein {ECO:0000313|EMBL:CDA44998.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Putative activity regulator of membrane protease YbbK
L3_068_368G1_scaffold_156_28
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(26256..27515)
DNA (1260bp) protein (420aa)
Peptidase dimerization domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AV88_9PROT
Peptidase dimerization domain protein {ECO:0000313|EMBL:CDA44997.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
L3_068_368G1_scaffold_156_29
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

27600..27890
DNA (291bp) protein (97aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AEM8_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA44996.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_068_368G1_scaffold_156_30
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

28055..29980
DNA (1926bp) protein (642aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A1S5_9PROT
Displaying items 1-30 of 65 in total

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