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L3_068_368G1_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_171_1
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=Q57KV0_SALCH
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBJ82401.1}; TaxID=406818 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii (strain SS-2004).;"
L3_068_368G1_scaffold_171_2
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191..349)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=Q83SY2_SALTI
Uncharacterized protein {ECO:0000313|EMBL:CRH35095.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
conserved protein of unknown function
L3_068_368G1_scaffold_171_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

601..1167
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANP8_CITK8
6-phosphogluconate phosphatase {ECO:0000313|EMBL:AKE59708.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
fructose-1-phosphatase
L3_068_368G1_scaffold_171_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1164..1592
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANP7_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL51922.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_5
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..3227
DNA (1557bp) protein (519aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase n=1 Tax=Salmonella bongori N268-08 RepID=S5MTI4_SALBN
L3_068_368G1_scaffold_171_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3376..3891
DNA (516bp) protein (172aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=2 Tax=Citrobacter RepID=R8V888_9ENTR
L3_068_368G1_scaffold_171_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3952..5490)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANP4_CITK8
Multidrug resistance protein EmrB {ECO:0000313|EMBL:GAL51919.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5506..6678)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANP3_CITK8
Multidrug resistance protein EmrA {ECO:0000313|EMBL:GAL51918.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_9
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6803..7333)
DNA (531bp) protein (177aa)
MarR-family transcriptional repressor n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLG9_CITRI
Transcriptional repressor MprA {ECO:0000313|EMBL:GAL51917.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
mprA; MarR family transcriptional regulator
L3_068_368G1_scaffold_171_10
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7424..7759)
DNA (336bp) protein (112aa)
Putative membrane protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HCZ2_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:GAL51916.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7749..8486)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANP0_CITK8
Putative LIV-E family transporter YgaZ {ECO:0000313|EMBL:GAL51915.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8611..9795)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANN9_CITK8
Transporter {ECO:0000313|EMBL:AKE59700.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_368G1_scaffold_171_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9951..10946)
DNA (996bp) protein (332aa)
Glycine betaine-binding periplasmic protein n=2 Tax=Citrobacter RepID=C1MAK4_9ENTR
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKE59699.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
proX; glycine betaine transporter periplasmic subunit
L3_068_368G1_scaffold_171_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11015..12079)
DNA (1065bp) protein (355aa)
Glycine betaine/L-proline transport system permease proW n=1 Tax=Citrobacter sp. KTE151 RepID=R8WRJ4_9ENTR
Glycine betaine/L-proline ABC transporter permease protein {ECO:0000313|EMBL:GAL51912.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glycine/betaine ABC transporter permease
L3_068_368G1_scaffold_171_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12072..13274)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANN6_CITK8
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY46984.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
glycine betaine transporter ATP-binding subunit
L3_068_368G1_scaffold_171_16
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13630..14589)
DNA (960bp) protein (320aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nrdF; ribonucleoside-diphosphate reductase 2 subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLH4_CITRI
L3_068_368G1_scaffold_171_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14600..16744)
DNA (2145bp) protein (715aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Ribonucleoside-diphosphate reductase n=13 Tax=Salmonella enterica I RepID=B5BEM2_SALPK
nrdE; ribonucleoside-diphosphate reductase 2 subunit alpha
L3_068_368G1_scaffold_171_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16717..17127)
DNA (411bp) protein (137aa)
Protein NrdI n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLH6_CITRI
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nrdI; NrdI protein
L3_068_368G1_scaffold_171_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17124..17369)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANN1_CITK8
Glutaredoxin-like protein NrdH {ECO:0000313|EMBL:GAL51907.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glutaredoxin-like protein
L3_068_368G1_scaffold_171_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17560..17991)
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANN0_CITK8
hypothetical protein
L3_068_368G1_scaffold_171_21
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18080..19423
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANM9_CITK8
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAL51905.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19484..19810)
DNA (327bp) protein (109aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLH8_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL51904.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_23
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19972..20316
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLH9_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL51903.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_24
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20352..20801)
DNA (450bp) protein (150aa)
L-alanine exporter AlaE n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TLI0_CITRI
L-alanine exporter AlaE {ECO:0000256|HAMAP-Rule:MF_00914}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21289..21690
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANM3_CITK8
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
DNA binding protein, nucleoid-associated
L3_068_368G1_scaffold_171_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21746..22273)
DNA (528bp) protein (176aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TM55_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL51900.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_368G1_scaffold_171_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22283..22582)
DNA (300bp) protein (100aa)
Transcriptional regulator, ArsR family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BHH1_9ENTR
Putative ArsR family transcriptional regulator YgaV {ECO:0000313|EMBL:GAL51899.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional regulator
L3_068_368G1_scaffold_171_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22764..22934
DNA (171bp) protein (57aa)
Uncharacterized protein n=150 Tax=Bacteria RepID=B5XRF9_KLEP3
Membrane protein {ECO:0000313|EMBL:AKE59684.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_368G1_scaffold_171_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23057..23506
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANM1_CITK8
Peptidoglycan-binding protein {ECO:0000313|EMBL:KEY46971.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
LysM domain/BON superfamily protein
L3_068_368G1_scaffold_171_30
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23513..24205)
DNA (693bp) protein (231aa)
HTH-type transcriptional repressor CsiR n=1 Tax=Shigella flexneri 1235-66 RepID=I6HD16_SHIFL
Transcriptional repressor CsiR {ECO:0000313|EMBL:GAL51896.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional regulator
Displaying items 1-30 of 58 in total

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