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L3_068_368G1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_208_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..3384)
DNA (3384bp) protein (1128aa)
Repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ2_9FIRM
Repeat protein {ECO:0000313|EMBL:EHM37533.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cell surface protein
L3_068_368G1_scaffold_208_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3541..4110)
DNA (570bp) protein (190aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DK75_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERI80086.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
NUDIX hydrolase
L3_068_368G1_scaffold_208_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4097..4594)
DNA (498bp) protein (166aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ0_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:EHM37531.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_368G1_scaffold_208_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4607..5437)
DNA (831bp) protein (277aa)
Thymidylate synthase {ECO:0000256|SAAS:SAAS00215270}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00273274};; EC=2.1.1.45 {ECO:0000256|SAAS:SAAS00215290};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXI9_9FIRM
L3_068_368G1_scaffold_208_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5586..6506)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55356.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
chromosome partitioning ATPase
L3_068_368G1_scaffold_208_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6606..7898)
DNA (1293bp) protein (431aa)
tRNA methylthiotransferase YqeV n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DK80_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:KGF55355.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8066..8311
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34244.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
HPr-related phosphotransferase system component
L3_068_368G1_scaffold_208_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8414..8998
DNA (585bp) protein (195aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34243.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_208_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9042..9311
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0372_04252 n=3 Tax=Clostridiales RepID=G9YXI4_9FIRM
UPF0237 protein HMPREF0995_02049 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ACT domain-containing protein
L3_068_368G1_scaffold_208_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9946..11304
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0372_03785 n=3 Tax=Clostridiales RepID=G9YW69_9FIRM
UPF0210 protein HMPREF0995_02047 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11458..12786
DNA (1329bp) protein (443aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW68_9FIRM
L3_068_368G1_scaffold_208_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13289..13702
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YW67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55349.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13881..14114
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YW66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34237.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_208_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14299..15333)
DNA (1035bp) protein (345aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BYR5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI62147.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator, XRE family
L3_068_368G1_scaffold_208_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15509..16267)
DNA (759bp) protein (253aa)
PP-loop family protein n=2 Tax=Clostridiales RepID=U2ARY6_9CLOT
PP-loop family protein {ECO:0000313|EMBL:ERI62148.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PP-loop domain-containing protein
L3_068_368G1_scaffold_208_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16490..16921
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=2 Tax=Clostridiales RepID=G9YW62_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rplM; 50S ribosomal protein L13
L3_068_368G1_scaffold_208_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16939..17343
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=3 Tax=Clostridiales RepID=G9YW61_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsI; 30S ribosomal protein S9
L3_068_368G1_scaffold_208_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17785..17949
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55342.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18092..18940
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55341.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPases involved in chromosome partitioning
L3_068_368G1_scaffold_208_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18894..19865
DNA (972bp) protein (324aa)
ParB-like partition protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR9_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EHO34090.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ParB-like partition proteins
L3_068_368G1_scaffold_208_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20148..24377
DNA (4230bp) protein (1410aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34089.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Cna protein B-type domain.
L3_068_368G1_scaffold_208_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24414..24503
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34088.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_208_23
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24573..24815
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EVH9_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI98862.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_068_368G1_scaffold_208_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24808..25044
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34086.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25041..25667
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55335.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25671..26315
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34084.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26315..27265
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34083.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27262..27807
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55332.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27820..28134
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34081.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_208_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28263..28895)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34080.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 52 in total

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