name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_068_368G1_scaffold_213_1
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
302..1399
|
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP29_CITK8
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:GAL50157.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
mltA; murein transglycosylase A
|
|
L3_068_368G1_scaffold_213_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1508..2314
|
ThiF family protein n=13 Tax=Escherichia coli RepID=D8A454_ECOLX
Sulfur acceptor protein CsdL {ECO:0000313|EMBL:AKE59820.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
sulfur acceptor protein CsdL
|
|
L3_068_368G1_scaffold_213_3
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2339..2785)
|
Cysteine desulfurase, sulfur acceptor subunit CsdE n=2 Tax=Citrobacter RepID=R8V3B7_9ENTR
Putative SufE-like protein YgdK {ECO:0000313|EMBL:GAL50159.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Fe-S metabolism associated protein
|
|
L3_068_368G1_scaffold_213_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2782..3990)
|
Cysteine desulfurase, catalytic subunit CsdA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BGV2_9ENTR
Cysteine sulfinate desulfinase {ECO:0000313|EMBL:GAL50160.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
cysteine sulfinate desulfinase
|
|
L3_068_368G1_scaffold_213_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4183..4410
|
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP24_CITK8
Uncharacterized protein {ECO:0000313|EMBL:KDF09287.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
|
|
L3_068_368G1_scaffold_213_6
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4761..5678
|
Glycine cleavage system transcriptional activator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIN1_CITRI
Transcriptional activator GcvA {ECO:0000313|EMBL:GAL50162.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
gcvA; glycine cleavage system transcriptional activator
|
|
L3_068_368G1_scaffold_213_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5697..6092
|
Putative outer membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIN0_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL50163.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
|
|
L3_068_368G1_scaffold_213_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6085..7185
|
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
mtfA; RNA 2'-O-ribose methyltransferase (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase M n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIM9_CITRI
|
|
L3_068_368G1_scaffold_213_9
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7765..7932
|
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L4BMC2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:GAL50165.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
membrane protein
|
|
L3_068_368G1_scaffold_213_10
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8055..8702
|
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XTC8_9PROT
Putative two-component response regulator {ECO:0000313|EMBL:GAL50166.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ompR; OmpR protein
|
|
L3_068_368G1_scaffold_213_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8771..9328
|
Uncharacterized protein {ECO:0000313|EMBL:GAL50167.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
|
|
L3_068_368G1_scaffold_213_12
unknown
|
Not on your lists |
comp(9351..9866)
|
This feature has no annotations |
|
L3_068_368G1_scaffold_213_13
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9856..10734)
|
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBN6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:GAL50168.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
drug/metabolite exporter, EamA family
|
|
L3_068_368G1_scaffold_213_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10781..11332)
|
Uncharacterized protein {ECO:0000313|EMBL:GAL50169.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
|
|
L3_068_368G1_scaffold_213_15
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11573..11980)
|
Uncharacterized protein n=6 Tax=Klebsiella RepID=R8X7D4_9ENTR
Putative DNA-binding protein {ECO:0000313|EMBL:GAL50170.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
|
|
L3_068_368G1_scaffold_213_16
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12848..13321)
|
Uncharacterized protein {ECO:0000313|EMBL:GAL50172.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
|
|
L3_068_368G1_scaffold_213_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13318..14034)
|
Putative transcriptional regulator n=2 Tax=Shigella flexneri RepID=F5N9S2_SHIFL
Putative DNA-binding protein {ECO:0000313|EMBL:GAL50173.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Transcriptional regulator, CadC,Transcriptional regulatory protein, C terminal
|
|
L3_068_368G1_scaffold_213_18
unknown
|
Not on your lists |
comp(14436..15059)
|
This feature has no annotations |
|
L3_068_368G1_scaffold_213_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15237..15824)
|
Uncharacterized protein {ECO:0000313|EMBL:GAL50174.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
|
|
L3_068_368G1_scaffold_213_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16229..16939)
|
L-fucose operon activator n=2 Tax=Citrobacter RepID=C1MAY5_9ENTR
Transcriptional activator FucR {ECO:0000313|EMBL:GAL50175.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
DNA-binding transcriptional activator FucR
|
|
L3_068_368G1_scaffold_213_21
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16982..17404)
|
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-fucose mutarotase n=499 Tax=Salmonella enterica I RepID=FUCM_SALA4
L-fucose mutarotase
|
|
L3_068_368G1_scaffold_213_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17416..18813)
|
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-fuculokinase n=2 Tax=Salmonella virchow RepID=B5Q726_SALVI
SBOV30231; hypothetical protein
|
|
L3_068_368G1_scaffold_213_23
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18866..20641)
|
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-fucose isomerase n=1 Tax=Escherichia coli UMEA 4076-1 RepID=T9XK87_ECOLX
fucI; L-fucose isomerase
|
|
L3_068_368G1_scaffold_213_24
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21118..22617
|
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Putative ABC transporter ATP-binding protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIM4_CITRI
ABC transporter ATP-binding protein
|
|
L3_068_368G1_scaffold_213_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22621..23604
|
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L2VNZ8_ECOLX
Putative sugar ABC transporter permease protein {ECO:0000313|EMBL:GAL50180.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ribose ABC transporter permease
|
|
L3_068_368G1_scaffold_213_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23676..24626
|
Periplasmic binding protein and sugar binding domain of the LacI family protein n=39 Tax=Escherichia coli RepID=I2SNJ5_ECOLX
Putative sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAL50181.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ABC transporter substrate-binding protein
|
|
L3_068_368G1_scaffold_213_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24770..25768
|
Putative transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIM0_CITRI
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:GAL50182.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional regulator
|
|
L3_068_368G1_scaffold_213_28
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25826..26473
|
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIL9_CITRI
|
|
L3_068_368G1_scaffold_213_29
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26539..27294)
|
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Flap endonuclease Xni n=2 Tax=Citrobacter RepID=R8V438_9ENTR
xni; exonuclease IX
|
|
L3_068_368G1_scaffold_213_30
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27407..28774)
|
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP06_CITK8
L-serine dehydratase SdaB {ECO:0000313|EMBL:GAL50185.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
|