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L3_068_368G1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_214_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(283..1368)
DNA (1086bp) protein (362aa)
Spore germination protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57586.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spore germination protein KB
L3_068_368G1_scaffold_214_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1401..2495)
DNA (1095bp) protein (365aa)
Ger(X)C family germination protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ93_9FIRM
Ger(X)C family germination protein {ECO:0000313|EMBL:EHO27426.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
germination protein Ger(x)C
L3_068_368G1_scaffold_214_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2492..4012)
DNA (1521bp) protein (507aa)
Phage tail component protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQA8_9FIRM
Phage tail component protein {ECO:0000313|EMBL:EHM51672.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
spore germination protein KA
L3_068_368G1_scaffold_214_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4240..4740
DNA (501bp) protein (167aa)
Respiratory-chain NADH dehydrogenase subunit n=3 Tax=Clostridiales RepID=G9YQA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27428.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_068_368G1_scaffold_214_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4753..6018
DNA (1266bp) protein (422aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
HymB family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASD8_9CLOT
HymB family protein {ECO:0000313|EMBL:ERI68734.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_368G1_scaffold_214_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6015..7766
DNA (1752bp) protein (584aa)
Putative ferredoxin hydrogenase HydA1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57591.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative iron hydrogenase
L3_068_368G1_scaffold_214_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8380..9765
DNA (1386bp) protein (462aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Pyridoxal-phosphate dependent TrpB-like enzyme n=2 Tax=Clostridiales RepID=H1CJ99_9FIRM
hypothetical protein
L3_068_368G1_scaffold_214_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9851..10579
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27433.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_214_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10662..13307)
DNA (2646bp) protein (882aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXP1_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EHM37173.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MgtA4; cation transport ATPase
L3_068_368G1_scaffold_214_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13393..14082)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=G9YXP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27436.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator receiver protein
L3_068_368G1_scaffold_214_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14085..14444)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27437.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA-binding protein
L3_068_368G1_scaffold_214_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14584..15825)
DNA (1242bp) protein (414aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PPIC-type PPIASE domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BAM6_9CLOT
PpiC-type peptidyl-prolyl cis-trans isomerase
L3_068_368G1_scaffold_214_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15917..19426)
DNA (3510bp) protein (1170aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI14_9CLOT
L3_068_368G1_scaffold_214_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19647..19964)
DNA (318bp) protein (106aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CNI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27371.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spermine/spermidine acetyltransferase
L3_068_368G1_scaffold_214_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19975..20571)
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B9K6_9CLOT
L3_068_368G1_scaffold_214_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20646..21605)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=2 Tax=Clostridiales RepID=G9YXP9_9FIRM
L3_068_368G1_scaffold_214_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21665..22858)
DNA (1194bp) protein (398aa)
putative glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=2 Tax=Clostridiales RepID=H1CJB1_9FIRM
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EHO27374.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_214_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23073..23534)
DNA (462bp) protein (154aa)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27375.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_214_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23757..24146
DNA (390bp) protein (130aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YXQ3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI68885.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator, GntR family
L3_068_368G1_scaffold_214_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24139..25041
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57558.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative ABC transporter ATP-binding protein
L3_068_368G1_scaffold_214_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24995..26932
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27378.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_214_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27107..28366
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXQ6_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EHM37188.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_068_368G1_scaffold_214_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28494..29147
DNA (654bp) protein (218aa)
putative CoA-transferase alpha subunit (EC:2.8.3.-)
Putative 3-oxoadipate CoA-transferase subunit A n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57561.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_368G1_scaffold_214_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29147..29806
DNA (660bp) protein (220aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.8)
Butyrate--acetoacetate CoA-transferase subunit B n=3 Tax=Clostridiales RepID=G9YXQ8_9FIRM
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EHO27381.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_214_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29880..30086)
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27382.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_214_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30418..30909)
DNA (492bp) protein (164aa)
Putative carbon monoxide dehydrogenase, small subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR1_9FIRM
Putative carbon monoxide dehydrogenase, small subunit {ECO:0000313|EMBL:EHM37193.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xanthine dehydrogenase
L3_068_368G1_scaffold_214_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30906..31787)
DNA (882bp) protein (294aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57565.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_068_368G1_scaffold_214_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31789..34089)
DNA (2301bp) protein (767aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BAP3_9CLOT
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:ERI68913.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_368G1_scaffold_214_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34324..35043
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI30_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERI68912.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
LytTr DNA-binding domain-containing protein
L3_068_368G1_scaffold_214_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35040..36323
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27387.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
signal transduction histidine kinase regulating citrate/malate metabolism
Displaying items 1-30 of 49 in total

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