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L3_068_368G1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_217_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(101..1336)
DNA (1236bp) protein (412aa)
Transposase n=8 Tax=Bacteroidales RepID=A6L0S2_BACV8
transposase
Uncharacterized protein {ECO:0000313|EMBL:EKN28050.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_068_368G1_scaffold_217_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2074..3342
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides RepID=D4WMI2_BACOV
Signal transduction histidine kinase
L3_068_368G1_scaffold_217_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3573..5300)
DNA (1728bp) protein (576aa)
Amino acid antiporter n=5 Tax=Bacteroides RepID=D7K4W8_9BACE
Putative glutamate/gamma-aminobutyrate antiporter {ECO:0000313|EMBL:EFF50162.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Amino acid transporters
L3_068_368G1_scaffold_217_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5517..6299
DNA (783bp) protein (261aa)
Ion channel n=4 Tax=Bacteroides RepID=D4WMI4_BACOV
Ion channel {ECO:0000313|EMBL:EFF50163.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Ion channel.
L3_068_368G1_scaffold_217_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6710..7675)
DNA (966bp) protein (322aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=3 Tax=Bacteroides RepID=D4WMI5_BACOV
L3_068_368G1_scaffold_217_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7684..9126)
DNA (1443bp) protein (481aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase n=4 Tax=Bacteroides RepID=C3QMM6_9BACE
L3_068_368G1_scaffold_217_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9157..9279
DNA (123bp) protein (41aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9SKS9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56383.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_068_368G1_scaffold_217_8
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9643..10899
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=D4WMI7_BACOV
Transporter major facilitator family protein {ECO:0000313|EMBL:CDB57971.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Cyanate permease
L3_068_368G1_scaffold_217_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10903..11802
DNA (900bp) protein (300aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I9SLS8_BACOV
Putative membrane protein {ECO:0000313|EMBL:EDO14165.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
EamA-like transporter family.
L3_068_368G1_scaffold_217_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11855..12247)
DNA (393bp) protein (131aa)
Histidine triad domain protein n=5 Tax=Bacteroides RepID=C3QMM2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY56769.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_068_368G1_scaffold_217_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12299..12829)
DNA (531bp) protein (177aa)
Transcription elongation factor GreA n=7 Tax=Bacteroides RepID=A7LUZ4_BACOV
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
transcription elongation factor GreA
L3_068_368G1_scaffold_217_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12945..14096)
DNA (1152bp) protein (384aa)
Antioxidant, AhpC/TSA family n=6 Tax=Bacteroides RepID=D4WMJ1_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFI38212.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
AhpC/TSA family.
L3_068_368G1_scaffold_217_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14293..16419
DNA (2127bp) protein (709aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Polyribonucleotide nucleotidyltransferase n=5 Tax=Bacteroides RepID=D6CX87_9BACE
L3_068_368G1_scaffold_217_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17118..17381)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMJ3_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50172.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_068_368G1_scaffold_217_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17601..18074
DNA (474bp) protein (158aa)
DNA-binding helix-turn-helix protein n=6 Tax=Bacteroides RepID=A7LUY9_BACOV
DNA-binding protein {ECO:0000313|EMBL:EFF50173.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Helix-turn-helix.
L3_068_368G1_scaffold_217_16
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18104..19861
DNA (1758bp) protein (586aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JCT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB59075.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_068_368G1_scaffold_217_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20077..22359)
DNA (2283bp) protein (761aa)
Putative alpha-1,2-mannosidase n=2 Tax=Bacteroides RepID=C3QML5_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFF50175.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-1,2-mannosidase, putative
L3_068_368G1_scaffold_217_18
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22776..23837)
DNA (1062bp) protein (354aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Bacteroides RepID=C3QML4_9BACE
L3_068_368G1_scaffold_217_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23863..24822)
DNA (960bp) protein (320aa)
phosphate butyryltransferase (EC:2.3.1.8 2.3.1.19)
Phosphate acetyl/butyryl transferase n=7 Tax=Bacteroides RepID=A7LUY5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56369.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_068_368G1_scaffold_217_20
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25002..25805
DNA (804bp) protein (268aa)
Glycosyl hydrolase family 16 n=3 Tax=Bacteroides RepID=C3QML2_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:CDB59071.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
beta-glucanase
L3_068_368G1_scaffold_217_21
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25814..26722
DNA (909bp) protein (303aa)
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF (EC:3.4.17.13)
LD-carboxypeptidase n=3 Tax=Bacteroides RepID=C3QML1_9BACE
LD-carboxypeptidase {ECO:0000313|EMBL:CDB59070.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_068_368G1_scaffold_217_22
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26808..27788
DNA (981bp) protein (327aa)
Peptidase, M28 family n=6 Tax=Bacteroides RepID=A7LUY2_BACOV
Glutamine cyclotransferase-related protein {ECO:0000313|EMBL:CDB59069.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Predicted aminopeptidases
L3_068_368G1_scaffold_217_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27898..28323
DNA (426bp) protein (142aa)
Fe-S metabolism associated domain protein n=7 Tax=Bacteroides RepID=A7LUY1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56782.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Cysteine desulfuration protein SufE
L3_068_368G1_scaffold_217_24
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28337..29116)
DNA (780bp) protein (260aa)
CAAX amino terminal protease family protein n=4 Tax=Bacteroides RepID=C3QMK8_9BACE
Transmembrane CAAX amino protease family protein {ECO:0000313|EMBL:EFI38224.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
CAAX amino terminal protease family.
L3_068_368G1_scaffold_217_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29123..29212)
DNA (90bp) protein (30aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I0PY26_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM98891.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_068_368G1_scaffold_217_26
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29219..30166)
DNA (948bp) protein (316aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Riboflavin biosynthesis protein RibF n=4 Tax=Bacteroides RepID=C3QMK7_9BACE
riboflavin biosynthesis protein RibF
L3_068_368G1_scaffold_217_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30177..30800)
DNA (624bp) protein (208aa)
HAD hydrolase, family IA, variant 3 n=7 Tax=Bacteroides RepID=A7LUX8_BACOV
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDO12813.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_068_368G1_scaffold_217_28
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30790..33495)
DNA (2706bp) protein (902aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEO53189.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEO53189.1};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
plasma-membrane calcium-translocating P-type ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=4 Tax=Bacteroides RepID=C3QMK5_9BACE
L3_068_368G1_scaffold_217_29
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33586..33999)
DNA (414bp) protein (138aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Bacteroides RepID=C3QMK4_9BACE
Signal transduction histidine kinase
L3_068_368G1_scaffold_217_30
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33986..34849)
DNA (864bp) protein (288aa)
Histidine kinase A domain protein n=4 Tax=Bacteroides RepID=C3QMK3_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:EFI38229.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Signal transduction histidine kinase
Displaying items 1-30 of 86 in total

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