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L3_068_368G1_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_221_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..286)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27680.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_221_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(577..972)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M0B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64440.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_068_368G1_scaffold_221_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(978..1892)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61623.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_068_368G1_scaffold_221_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2016..2492)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TI99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69444.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_068_368G1_scaffold_221_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2500..3492)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99551.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_068_368G1_scaffold_221_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3691..4827)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76058.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_368G1_scaffold_221_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5035..5748
DNA (714bp) protein (238aa)
LytTr DNA-binding domain protein n=2 Tax=Oscillibacter RepID=U2R578_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERK68336.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
lytT; response regulator
L3_068_368G1_scaffold_221_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5783..6019)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_068_368G1_scaffold_221_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6032..6346)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_068_368G1_scaffold_221_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6380..7276)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_068_368G1_scaffold_221_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7314..7661
DNA (348bp) protein (116aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJ70_9FIRM
Signal transduction histidine kinase
L3_068_368G1_scaffold_221_12
unknown

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7676..7939
DNA (264bp) protein (88aa)

This feature has no annotations

L3_068_368G1_scaffold_221_13
unknown

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8107..8403
DNA (297bp) protein (99aa)

This feature has no annotations

L3_068_368G1_scaffold_221_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8622..11378
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44223.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sigma-54 interacting domain-containing protein
L3_068_368G1_scaffold_221_15
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11412..11825
DNA (414bp) protein (138aa)
PTS system fructose IIA component n=3 Tax=Anaerostipes RepID=B0MII3_9FIRM
PTS system fructose IIA protein {ECO:0000313|EMBL:EFV23508.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
PTS sugar transporter
L3_068_368G1_scaffold_221_16
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11899..12372
DNA (474bp) protein (158aa)
PTS system sorbose subfamily IIB component n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPC0_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EFP60620.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
PTS system mannose-specific transporter subunit IIB
L3_068_368G1_scaffold_221_17
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12392..13168
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35522.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
PTS system sorbose-specific transporter subunit IIC
L3_068_368G1_scaffold_221_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13152..14018
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QZ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45028.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_068_368G1_scaffold_221_19
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14128..14964
DNA (837bp) protein (279aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1XZT8_9ACTN
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:ERI05507.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
membrane complex biogenesis protein, BtpA family
L3_068_368G1_scaffold_221_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14961..15473
DNA (513bp) protein (171aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00108586}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00108586};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Tryptophan synthase alpha chain n=2 Tax=Coprococcus RepID=R6LA50_9FIRM
tryptophan synthase subunit alpha
L3_068_368G1_scaffold_221_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15850..16479)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12132.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_068_368G1_scaffold_221_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16731..17909
DNA (1179bp) protein (393aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Clostridium difficile F200 RepID=T4WLC6_CLODI
Transposase {ECO:0000313|EMBL:EFB77623.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative transposase for insertion sequence element
L3_068_368G1_scaffold_221_23
unknown

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comp(18121..18267)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_068_368G1_scaffold_221_24
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18383..19714)
DNA (1332bp) protein (444aa)
transcriptional regulator n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3870F
Divergent AAA domain protein {ECO:0000313|EMBL:EEF69502.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative transcriptional regulator with HTH domain
L3_068_368G1_scaffold_221_25
unknown

Not on your lists

comp(19841..20272)
DNA (432bp) protein (144aa)

This feature has no annotations

L3_068_368G1_scaffold_221_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20362..22362)
DNA (2001bp) protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DNA ligase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYY9_9FIRM
NAD-dependent DNA ligase
L3_068_368G1_scaffold_221_27
unknown

Not on your lists

comp(22509..22979)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_068_368G1_scaffold_221_28
unknown

Not on your lists

comp(22995..23234)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_068_368G1_scaffold_221_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23234..24346)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YD33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13061.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_068_368G1_scaffold_221_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24352..24537)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55482.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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