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L3_068_368G1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_289_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46..255)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R387_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50245.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_068_368G1_scaffold_289_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

332..1063
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GXB1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI71722.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_068_368G1_scaffold_289_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1105..1743
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R386_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY21240.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1789..2976
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R384_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY21242.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2948..4909
DNA (1962bp) protein (654aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R383_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI71721.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_068_368G1_scaffold_289_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4946..5155
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R382_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY21244.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_7
unknown

Not on your lists

5347..5439
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R380_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_8
unknown

Not on your lists

5436..5528
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R379_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5558..7231
DNA (1674bp) protein (558aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Potassium-transporting ATPase A chain n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R378_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7233..9371
DNA (2139bp) protein (713aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Potassium-transporting ATPase B chain n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R377_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9396..10004
DNA (609bp) protein (203aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Potassium-transporting ATPase C chain n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R376_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10190..13033
DNA (2844bp) protein (948aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R375_BIFLM
hypothetical protein
L3_068_368G1_scaffold_289_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13038..13742
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R374_BIFLM
hypothetical protein
Fis family transcriptional regulator {ECO:0000313|EMBL:KEY21249.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13925..14161)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R373_BIFLM
hypothetical protein
Glutaredoxin {ECO:0000313|EMBL:KEY21250.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_15
unknown

Not on your lists

14223..15071
DNA (849bp) protein (283aa)

This feature has no annotations

L3_068_368G1_scaffold_289_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15389..16207
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R372_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY21252.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16303..17151
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R371_BIFLM
hypothetical protein
Sortase family protein {ECO:0000313|EMBL:EEQ55822.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_368G1_scaffold_289_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17148..17306
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R370_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97507.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_068_368G1_scaffold_289_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17459..18640)
DNA (1182bp) protein (394aa)
Phage integrase family Protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R369_BIFLM
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:KFI67938.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_068_368G1_scaffold_289_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18823..19077)
DNA (255bp) protein (85aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DRZ7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY21253.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_368G1_scaffold_289_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19101..19820)
DNA (720bp) protein (240aa)
Predicted phosphatases (EC:3.1.3.18)
Predicted phosphatases n=14 Tax=Bifidobacterium RepID=D6DDD2_BIFLN
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFV36751.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_068_368G1_scaffold_289_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19952..20299)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=17 Tax=Bifidobacterium RepID=B3DRZ5_BIFLD
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_368G1_scaffold_289_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20414..23005)
DNA (2592bp) protein (864aa)
DEAD/DEAH box helicase n=3 Tax=Bifidobacterium longum RepID=I3B2N4_BIFLN
helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:KEY33061.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_368G1_scaffold_289_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23018..23335)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=V6XWP6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97500.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_068_368G1_scaffold_289_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23346..25259)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=V6Y178_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV33584.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_068_368G1_scaffold_289_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25399..26928)
DNA (1530bp) protein (510aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUE1_BIFLJ
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ADH00497.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
UTP--glucose-1-phosphate uridylyltransferase
L3_068_368G1_scaffold_289_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27283..29412)
DNA (2130bp) protein (710aa)
cytidylate kinase (EC:2.7.4.14)
Small GTP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUE2_BIFLJ
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_068_368G1_scaffold_289_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29409..30179)
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Pseudouridine synthase n=19 Tax=Bifidobacterium RepID=B3DRY9_BIFLD
pseudouridine synthase
L3_068_368G1_scaffold_289_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30375..31343
DNA (969bp) protein (323aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=6 Tax=Bifidobacterium RepID=D6DDC6_BIFLN
glycerol uptake facilitator protein
Probable membrane channel protein {ECO:0000313|EMBL:BAP83591.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_068_368G1_scaffold_289_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31242..31544)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MW24_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV36742.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy