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L3_068_368G1_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_290_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..234)
DNA (234bp) protein (78aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27190.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Uncharacterized conserved protein (DUF2088).
L3_068_368G1_scaffold_290_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(218..1366)
DNA (1149bp) protein (383aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BWV2_9CLOT
3-dehydroquinate synthase {ECO:0000313|EMBL:ERI76695.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_368G1_scaffold_290_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1381..2859)
DNA (1479bp) protein (493aa)
Membrane protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BF06_9CLOT
Membrane protein {ECO:0000313|EMBL:ERI76694.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_368G1_scaffold_290_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2875..3351)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI76693.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_368G1_scaffold_290_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3446..4426)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5F6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76692.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_068_368G1_scaffold_290_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4474..5520)
DNA (1047bp) protein (349aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=2 Tax=Clostridiales RepID=H1CJI5_9FIRM
L3_068_368G1_scaffold_290_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5517..6422)
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthetase family protein n=2 Tax=Clostridiales RepID=G9YMI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27196.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dihydrodipicolinate synthetase
L3_068_368G1_scaffold_290_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6455..8146)
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI7_9FIRM
L3_068_368G1_scaffold_290_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8143..8973)
DNA (831bp) protein (277aa)
Transcriptional regulator, IclR family protein n=3 Tax=Clostridiales RepID=G9YMI8_9FIRM
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:ERI76688.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
IclR family transcriptional regulator
L3_068_368G1_scaffold_290_10
unknown

Not on your lists

comp(9161..9349)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_068_368G1_scaffold_290_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9440..10456
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27199.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L3_068_368G1_scaffold_290_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10493..11518
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27200.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L3_068_368G1_scaffold_290_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11597..13108
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJJ1_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:ERI76684.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter
L3_068_368G1_scaffold_290_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13114..14163
DNA (1050bp) protein (350aa)
Putative ribose ABC transporter permease protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY18_9CLOT
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ERI76683.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type transporter, integral membrane subunit
L3_068_368G1_scaffold_290_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14183..15223
DNA (1041bp) protein (347aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridiales RepID=U2D5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27203.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain containing protein
L3_068_368G1_scaffold_290_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15243..16157
DNA (915bp) protein (305aa)
AP endonuclease, family 2 n=3 Tax=Clostridiales RepID=G9YMJ6_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EHM54074.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xylose isomerase domain-containing protein TIM barrel
L3_068_368G1_scaffold_290_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16208..17020
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27205.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AMP-dependent synthetase and ligase
L3_068_368G1_scaffold_290_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17031..18014
DNA (984bp) protein (328aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C1S1_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERI61336.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oxidoreductase domain protein
L3_068_368G1_scaffold_290_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18278..19036)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27207.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GntR family transcriptional regulator
L3_068_368G1_scaffold_290_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19132..20571)
DNA (1440bp) protein (480aa)
succinate CoA transferase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ8_9FIRM
Succinate CoA transferase {ECO:0000313|EMBL:EHO27208.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_290_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20680..21879)
DNA (1200bp) protein (400aa)
Acetyl-CoA C-acetyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AML2_9CLOT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ERI61340.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
acetyl-CoA acetyltransferase
L3_068_368G1_scaffold_290_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21902..23071)
DNA (1170bp) protein (390aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27210.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_290_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23102..24466)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK1_9FIRM
L3_068_368G1_scaffold_290_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24495..25085)
DNA (591bp) protein (197aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=3 Tax=Clostridiales RepID=G9YLK3_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:ERI61343.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_068_368G1_scaffold_290_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25119..26003)
DNA (885bp) protein (295aa)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=2 Tax=Clostridiales RepID=G9YLK4_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EHO27213.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
L3_068_368G1_scaffold_290_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26070..27428)
DNA (1359bp) protein (453aa)
MmgE/PrpD family protein n=2 Tax=Clostridiales RepID=U2AML7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54080.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
MmgE/PrpD family protein
L3_068_368G1_scaffold_290_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27829..28692
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27215.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_068_368G1_scaffold_290_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28719..29918
DNA (1200bp) protein (400aa)
Putative hemolysin n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BWG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54078.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
class I and II aminotransferase
L3_068_368G1_scaffold_290_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29961..30809
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27217.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_068_368G1_scaffold_290_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30845..32017
DNA (1173bp) protein (391aa)
amidohydrolase (EC:3.5.1.14 3.5.1.47)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RUX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54076.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Displaying items 1-30 of 36 in total

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