name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_068_368G1_scaffold_321_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1..183
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Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APG0_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL09077.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
180..1049
|
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia RepID=R6BKU2_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA53942.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
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L3_068_368G1_scaffold_321_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1206..1421
|
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GDY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00011.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
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L3_068_368G1_scaffold_321_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1658..5557
|
Cation/multidrug efflux pump n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYI2_9FIRM
Cation/multidrug efflux pump {ECO:0000313|EMBL:CDA53934.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Cation/multidrug efflux pump
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L3_068_368G1_scaffold_321_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5981..8644
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valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Valine--tRNA ligase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUQ7_9FIRM
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L3_068_368G1_scaffold_321_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8787..8894
|
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSG3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09815.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8985..10361
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Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain n=3 Tax=Roseburia RepID=D4KUQ8_9FIRM
Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Predicted polymerase most proteins contain PALM domain HD hydrolase domain and Zn-ribbon domain {ECO:0000313|EMBL:CDA53932.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L3_068_368G1_scaffold_321_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10540..10683
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Uncharacterized protein n=4 Tax=Roseburia RepID=C7GDX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11099.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10732..12096
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Tetratricopeptide repeat n=2 Tax=Roseburia intestinalis RepID=D4KSG6_9FIRM
Tetratricopeptide repeat.
Tetratricopeptide repeat {ECO:0000313|EMBL:CBL11100.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12233..12544
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Anti-sigma factor antagonist n=2 Tax=Roseburia intestinalis RepID=D4KSG7_9FIRM
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12729..13178
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anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=4 Tax=Roseburia RepID=D4KUR3_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CDA53928.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L3_068_368G1_scaffold_321_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13180..13926
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RNA polymerase sigma factor n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUR4_9FIRM
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14075..14839
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Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUR6_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBL11106.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14899..15933
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HD-GYP domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYH4_9FIRM
HD-GYP domain {ECO:0000313|EMBL:CDA53924.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
HD-GYP domain
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L3_068_368G1_scaffold_321_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15942..17030
|
HD-GYP domain n=3 Tax=Roseburia RepID=D4KSH2_9FIRM
HD-GYP domain
HD-GYP domain {ECO:0000313|EMBL:CDA53923.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L3_068_368G1_scaffold_321_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17027..17701)
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Cyclic nucleotide-binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDW9_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEU99995.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
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L3_068_368G1_scaffold_321_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17897..18607
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4Fe-4S binding domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSH4_9FIRM
4Fe-4S binding domain.
4Fe-4S binding domain {ECO:0000313|EMBL:CBL09826.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18636..20216
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Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDW7_9FIRM
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L3_068_368G1_scaffold_321_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
20437..21771
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Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSH6_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL09828.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22047..23543
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Beta-xylosidase n=2 Tax=Roseburia intestinalis RepID=D4KUS1_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBL11111.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23671..24237
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Looped-hinge helix DNA binding domain, AbrB family n=3 Tax=Roseburia RepID=D4KUT0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA56619.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
looped-hinge helix DNA binding domain, AbrB family
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L3_068_368G1_scaffold_321_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24285..24851
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Acyltransferase family n=2 Tax=Roseburia RepID=D4KKJ4_9FIRM
Acyltransferase family.
Acyltransferase family {ECO:0000313|EMBL:CBL07396.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24859..25287
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Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99988.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
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L3_068_368G1_scaffold_321_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25541..25987
|
Heat shock protein Hsp20 n=4 Tax=Roseburia RepID=D4KKJ6_9FIRM
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:CBL11122.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
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L3_068_368G1_scaffold_321_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26214..26888
|
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKJ7_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL07399.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26892..27227
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Signal transduction histidine kinase n=2 Tax=Roseburia intestinalis RepID=D4KKJ8_9FIRM
Signal transduction histidine kinase
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L3_068_368G1_scaffold_321_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
27236..28288
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Signal transduction histidine kinase n=2 Tax=Roseburia intestinalis RepID=D4KKJ8_9FIRM
Signal transduction histidine kinase
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L3_068_368G1_scaffold_321_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
28431..29150
|
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKJ9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07401.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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L3_068_368G1_scaffold_321_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
29308..31704
|
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXI5_9FIRM
Glycosyl hydrolase {ECO:0000313|EMBL:CDA56593.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
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L3_068_368G1_scaffold_321_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
31900..32610
|
Response regulator of the LytR/AlgR family n=2 Tax=Roseburia intestinalis RepID=D4KKK1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL07403.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
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