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L3_068_368G1_scaffold_332

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_368G1_scaffold_332_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100..2187)
DNA (2088bp) protein (696aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA primase n=2 Tax=Bifidobacterium longum RepID=B3DT81_BIFLD
dnaG; DNA primase
L3_068_368G1_scaffold_332_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2351..3658)
DNA (1308bp) protein (436aa)
Putative dGTPase n=3 Tax=Bifidobacterium longum RepID=I3ASN3_BIFLN
deoxyguanosinetriphosphate triphosphohydrolase
Putative dGTPase {ECO:0000313|EMBL:EIJ32276.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_068_368G1_scaffold_332_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3830..5182)
DNA (1353bp) protein (451aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine racemase n=2 Tax=Bifidobacterium RepID=E5XY78_9BIFI
alr; alanine racemase
L3_068_368G1_scaffold_332_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5377..6837
DNA (1461bp) protein (487aa)
Amino acid permease-associated region n=3 Tax=Bifidobacterium longum RepID=D6ZT09_BIFLJ
amino acid transport protein
Putative amino acid transport protein {ECO:0000313|EMBL:BAJ70622.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_068_368G1_scaffold_332_5
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7535..8566
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SMK5_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERH31887.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
LacI family transcriptional regulator
L3_068_368G1_scaffold_332_6
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8810..10114
DNA (1305bp) protein (435aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAA3_9BIFI
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFJ01390.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
ABC transporter, solute-binding protein
L3_068_368G1_scaffold_332_7
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10253..11194
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BV47_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KFJ01389.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
ABC transporter permease
L3_068_368G1_scaffold_332_8
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11268..12146
DNA (879bp) protein (293aa)
Sugar ABC transporter, permease protein n=3 Tax=Bifidobacterium dentium RepID=D2Q7F9_BIFDB
ABC transporter permease {ECO:0000313|EMBL:KFJ01388.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
sugar ABC transporter permease
L3_068_368G1_scaffold_332_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12224..13363
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B3DT85_BIFLD
Protein of unknown function (DUF2961).
Uncharacterized protein {ECO:0000313|EMBL:CBK70859.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_068_368G1_scaffold_332_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13621..14106)
DNA (486bp) protein (162aa)
Acetyltransferase (GNAT) domain protein n=5 Tax=Bifidobacterium longum RepID=I3ASX6_BIFLN
wecD; wecd
Uncharacterized protein {ECO:0000313|EMBL:EEQ54195.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_368G1_scaffold_332_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14405..14899)
DNA (495bp) protein (165aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
S-ribosylhomocysteine lyase n=3 Tax=Bifidobacterium breve RepID=F6C5U1_BIFBA
Autoinducer-2 production protein luxS
L3_068_368G1_scaffold_332_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15012..16967)
DNA (1956bp) protein (652aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Bifidobacterium longum RepID=Q8G567_BIFLO
recQ; ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AAN24958.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_068_368G1_scaffold_332_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17127..18851
DNA (1725bp) protein (575aa)
L,D-transpeptidase catalytic domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASW3_BIFLN
Peptidase {ECO:0000313|EMBL:KEY23276.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L3_068_368G1_scaffold_332_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18989..20173)
DNA (1185bp) protein (395aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:ESV33070.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ESV33070.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
MetC3 n=8 Tax=Bifidobacterium longum RepID=E4QZW5_BIFLM
metC3; metc3
L3_068_368G1_scaffold_332_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20265..21332)
DNA (1068bp) protein (356aa)
Cystathionine beta-synthase n=5 Tax=Bifidobacterium longum RepID=Q8G564_BIFLO
cysK; cysk
Cysteine synthase {ECO:0000313|EMBL:ACD98360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_068_368G1_scaffold_332_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21815..22600)
DNA (786bp) protein (262aa)
ABC-type oligopeptide transport system ATPase component n=7 Tax=Bifidobacterium RepID=B3DT92_BIFLD
peptide ABC transporter ATP-binding protein
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KEY32463.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_368G1_scaffold_332_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22593..23384)
DNA (792bp) protein (264aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=C5E8I5_BIFLI
ABC transporter {ECO:0000313|EMBL:EFV37361.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
dppD; dipeptide/oligopeptide/nickel ABC transporter ATPase
L3_068_368G1_scaffold_332_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23381..24283)
DNA (903bp) protein (301aa)
Peptides ABC transporter permease component n=9 Tax=Bifidobacterium RepID=E8MH68_BIFL2
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY32461.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_068_368G1_scaffold_332_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24280..25257)
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=3 Tax=Bifidobacterium longum RepID=B3DT95_BIFLD
peptides ABC transporter substrate-binding protein
Peptides ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI97980.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_068_368G1_scaffold_332_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25322..26941)
DNA (1620bp) protein (540aa)
DDpA2 n=5 Tax=Bifidobacterium RepID=E4QZX1_BIFLM
ddpA2; ddpa2
Bacterial extracellular solute-binding protein, family 5 Middle {ECO:0000313|EMBL:EFV37364.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_068_368G1_scaffold_332_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27067..27837
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Type III pantothenate kinase n=12 Tax=Bifidobacterium RepID=E4QZX2_BIFLM
hypothetical protein
L3_068_368G1_scaffold_332_22
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27897..29318)
DNA (1422bp) protein (474aa)
Bacterial extracellular solute-binding protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XY92_9BIFI
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EFV37366.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
family 1 extracellular solute-binding protein
L3_068_368G1_scaffold_332_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29434..30777)
DNA (1344bp) protein (448aa)
MalE-type ABC sugar transport system periplasmic component n=19 Tax=Bacteria RepID=B3DT99_BIFLD
sugar ABC transporter substrate-binding protein
MalE-type ABC sugar transport system periplasmic component {ECO:0000313|EMBL:ACD98368.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_068_368G1_scaffold_332_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31109..32461)
DNA (1353bp) protein (451aa)
ABC transporter, solute-binding protein n=6 Tax=Bifidobacterium RepID=C2GUR8_BIFLN
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIW43438.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_368G1_scaffold_332_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32621..34321
DNA (1701bp) protein (567aa)
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase n=4 Tax=Bifidobacterium longum RepID=IABF_BIFLN
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:AIW43437.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_368G1_scaffold_332_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34441..35454)
DNA (1014bp) protein (338aa)
Transcriptional regulator n=8 Tax=Bifidobacterium RepID=E8MS61_BIFL1
periplasmic-binding protein/LacI transcriptional regulator
RbsR-type transcription regulator/Ribose operon repressor {ECO:0000313|EMBL:ACD98371.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_068_368G1_scaffold_332_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35579..37654)
DNA (2076bp) protein (692aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Beta-galactosidase n=4 Tax=Bifidobacterium RepID=D6ZSZ0_BIFLJ
beta-galactosidase
L3_068_368G1_scaffold_332_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37869..38618)
DNA (750bp) protein (250aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8J6_BIFLI
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ54213.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
sugar ABC transporter permease
Displaying 28 items

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